html_url,issue_url,id,node_id,user,user_label,created_at,updated_at,author_association,body,reactions,issue,issue_label,performed_via_github_app https://github.com/simonw/datasette/issues/1249#issuecomment-808998719,https://api.github.com/repos/simonw/datasette/issues/1249,808998719,MDEyOklzc3VlQ29tbWVudDgwODk5ODcxOQ==,9599,simonw,2021-03-29T00:57:13Z,2021-03-29T00:57:13Z,OWNER,"I just shipped Datasette 0.56 - here's the CI run: https://github.com/simonw/datasette/runs/2214701802?check_suite_focus=true It pushed a new `latest` tag to https://hub.docker.com/r/datasetteproject/datasette/tags?page=1&ordering=last_updated docker pull datasetteproject/datasette:latest And then: docker run datasetteproject/datasette:latest datasette \ --load-extension=spatialite \ --get /-/versions.json | jq .sqlite Outputs: ```json { ""version"": ""3.27.2"", ""fts_versions"": [ ""FTS5"", ""FTS4"", ""FTS3"" ], ""extensions"": { ""json1"": null, ""spatialite"": ""5.0.1"" }, ""compile_options"": [ ""COMPILER=gcc-8.3.0"", ""ENABLE_COLUMN_METADATA"", ""ENABLE_DBSTAT_VTAB"", ""ENABLE_FTS3"", ""ENABLE_FTS3_PARENTHESIS"", ""ENABLE_FTS3_TOKENIZER"", ""ENABLE_FTS4"", ""ENABLE_FTS5"", ""ENABLE_JSON1"", ""ENABLE_LOAD_EXTENSION"", ""ENABLE_PREUPDATE_HOOK"", ""ENABLE_RTREE"", ""ENABLE_SESSION"", ""ENABLE_STMTVTAB"", ""ENABLE_UNLOCK_NOTIFY"", ""ENABLE_UPDATE_DELETE_LIMIT"", ""HAVE_ISNAN"", ""LIKE_DOESNT_MATCH_BLOBS"", ""MAX_SCHEMA_RETRY=25"", ""MAX_VARIABLE_NUMBER=250000"", ""OMIT_LOOKASIDE"", ""SECURE_DELETE"", ""SOUNDEX"", ""TEMP_STORE=1"", ""THREADSAFE=1"", ""USE_URI"" ] } ```","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-808649480,https://api.github.com/repos/simonw/datasette/issues/1249,808649480,MDEyOklzc3VlQ29tbWVudDgwODY0OTQ4MA==,9599,simonw,2021-03-27T04:32:10Z,2021-03-27T04:32:10Z,OWNER,I'll close this issue after I ship Datasette 0.56 and confirm that the Dockerfile was correctly built and published to Docker Hub.,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-808649322,https://api.github.com/repos/simonw/datasette/issues/1249,808649322,MDEyOklzc3VlQ29tbWVudDgwODY0OTMyMg==,9599,simonw,2021-03-27T04:31:28Z,2021-03-27T04:31:28Z,OWNER,"One last test of that Dockerfile: ``` (datasette) datasette % docker build -f Dockerfile -t datasetteproject/datasette:0.55a --build-arg VERSION=0.55 . (datasette) datasette % docker run datasetteproject/datasette:0.55a datasette --get '/-/versions.json' | jq { ""python"": { ""version"": ""3.9.2"", ""full"": ""3.9.2 (default, Feb 19 2021, 17:23:45) \n[GCC 8.3.0]"" }, ""datasette"": { ""version"": ""0.55"" }, ""asgi"": ""3.0"", ""uvicorn"": ""0.13.4"", ""sqlite"": { ""version"": ""3.27.2"", ""fts_versions"": [ ""FTS5"", ""FTS4"", ""FTS3"" ], ""extensions"": { ""json1"": null }, ""compile_options"": [ ""COMPILER=gcc-8.3.0"", ""ENABLE_COLUMN_METADATA"", ""ENABLE_DBSTAT_VTAB"", ""ENABLE_FTS3"", ""ENABLE_FTS3_PARENTHESIS"", ""ENABLE_FTS3_TOKENIZER"", ""ENABLE_FTS4"", ""ENABLE_FTS5"", ""ENABLE_JSON1"", ""ENABLE_LOAD_EXTENSION"", ""ENABLE_PREUPDATE_HOOK"", ""ENABLE_RTREE"", ""ENABLE_SESSION"", ""ENABLE_STMTVTAB"", ""ENABLE_UNLOCK_NOTIFY"", ""ENABLE_UPDATE_DELETE_LIMIT"", ""HAVE_ISNAN"", ""LIKE_DOESNT_MATCH_BLOBS"", ""MAX_SCHEMA_RETRY=25"", ""MAX_VARIABLE_NUMBER=250000"", ""OMIT_LOOKASIDE"", ""SECURE_DELETE"", ""SOUNDEX"", ""TEMP_STORE=1"", ""THREADSAFE=1"", ""USE_URI"" ] } } (datasette) datasette % docker run datasetteproject/datasette:0.55a datasette --get '/-/versions.json' --load-extension=spatialite | jq { ""python"": { ""version"": ""3.9.2"", ""full"": ""3.9.2 (default, Feb 19 2021, 17:23:45) \n[GCC 8.3.0]"" }, ""datasette"": { ""version"": ""0.55"" }, ""asgi"": ""3.0"", ""uvicorn"": ""0.13.4"", ""sqlite"": { ""version"": ""3.27.2"", ""fts_versions"": [ ""FTS5"", ""FTS4"", ""FTS3"" ], ""extensions"": { ""json1"": null, ""spatialite"": ""5.0.1"" }, ""compile_options"": [ ""COMPILER=gcc-8.3.0"", ""ENABLE_COLUMN_METADATA"", ""ENABLE_DBSTAT_VTAB"", ""ENABLE_FTS3"", ""ENABLE_FTS3_PARENTHESIS"", ""ENABLE_FTS3_TOKENIZER"", ""ENABLE_FTS4"", ""ENABLE_FTS5"", ""ENABLE_JSON1"", ""ENABLE_LOAD_EXTENSION"", ""ENABLE_PREUPDATE_HOOK"", ""ENABLE_RTREE"", ""ENABLE_SESSION"", ""ENABLE_STMTVTAB"", ""ENABLE_UNLOCK_NOTIFY"", ""ENABLE_UPDATE_DELETE_LIMIT"", ""HAVE_ISNAN"", ""LIKE_DOESNT_MATCH_BLOBS"", ""MAX_SCHEMA_RETRY=25"", ""MAX_VARIABLE_NUMBER=250000"", ""OMIT_LOOKASIDE"", ""SECURE_DELETE"", ""SOUNDEX"", ""TEMP_STORE=1"", ""THREADSAFE=1"", ""USE_URI"" ] } } ```","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-805033155,https://api.github.com/repos/simonw/datasette/issues/1249,805033155,MDEyOklzc3VlQ29tbWVudDgwNTAzMzE1NQ==,9599,simonw,2021-03-23T16:12:13Z,2021-03-23T16:12:13Z,OWNER,"Don't forget to update this bit of the docs: https://docs.datasette.io/en/0.55/spatialite.html#building-spatialite-from-source > The packaged versions of SpatiaLite usually provide SpatiaLite 4.3.0a. For an example of how to build the most recent unstable version, 4.4.0-RC0 (which includes the powerful [VirtualKNN module](https://www.gaia-gis.it/fossil/libspatialite/wiki?name=KNN)), take a look at the [Datasette Dockerfile](https://github.com/simonw/datasette/blob/master/Dockerfile). See also #1273","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804406675,https://api.github.com/repos/simonw/datasette/issues/1249,804406675,MDEyOklzc3VlQ29tbWVudDgwNDQwNjY3NQ==,9599,simonw,2021-03-22T21:26:27Z,2021-03-22T21:26:27Z,OWNER,(Without the `apt-get update ...` SpatiaLite line it's 125MB),"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804404544,https://api.github.com/repos/simonw/datasette/issues/1249,804404544,MDEyOklzc3VlQ29tbWVudDgwNDQwNDU0NA==,9599,simonw,2021-03-22T21:22:56Z,2021-03-22T21:24:24Z,OWNER,"Final version of Dockerfile which installs the specified version from GitHub: docker build . -t datasette-spatialite --build-arg VERSION=0.55 ```dockerfile FROM python:3.9.2-slim-buster as build # Version of Datasette to install, e.g. 0.55 # docker build . -t datasette --build-arg VERSION=0.55 ARG VERSION # software-properties-common provides add-apt-repository # which we need in order to install a more recent release # of libsqlite3-mod-spatialite from the sid distribution RUN apt-get update && \ apt-get -y --no-install-recommends install software-properties-common && \ add-apt-repository ""deb http://httpredir.debian.org/debian sid main"" && \ apt-get update && \ apt-get -t sid install -y --no-install-recommends libsqlite3-mod-spatialite && \ apt-get remove -y software-properties-common && \ apt clean && \ rm -rf /var/lib/apt && \ rm -rf /var/lib/dpkg RUN pip install https://github.com/simonw/datasette/archive/refs/tags/${VERSION}.zip && \ find /usr/local/lib -name '__pycache__' | xargs rm -r && \ rm -rf /root/.cache/pip EXPOSE 8001 CMD [""datasette""] ``` Run against 0.55 this produces an image of 262MB","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804384196,https://api.github.com/repos/simonw/datasette/issues/1249,804384196,MDEyOklzc3VlQ29tbWVudDgwNDM4NDE5Ng==,9599,simonw,2021-03-22T20:48:46Z,2021-03-22T20:48:46Z,OWNER,I think part of the reason it's smaller is that I ran `pip install datasette` instead of using `COPY . /datasette` followed by `pip install /datasette`.,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804380181,https://api.github.com/repos/simonw/datasette/issues/1249,804380181,MDEyOklzc3VlQ29tbWVudDgwNDM4MDE4MQ==,9599,simonw,2021-03-22T20:42:16Z,2021-03-22T20:42:16Z,OWNER,"Considering the image on Docker Hub is 383MB, I'm happy with getting that down to 262MB. I'm going to stop looking for new optimizations here.","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804379644,https://api.github.com/repos/simonw/datasette/issues/1249,804379644,MDEyOklzc3VlQ29tbWVudDgwNDM3OTY0NA==,9599,simonw,2021-03-22T20:41:23Z,2021-03-22T20:41:23Z,OWNER,I tried adding `apt-get remove -y software-properties-common &&` to remove `software-properties-common` but it made no difference to the image size.,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804372977,https://api.github.com/repos/simonw/datasette/issues/1249,804372977,MDEyOklzc3VlQ29tbWVudDgwNDM3Mjk3Nw==,9599,simonw,2021-03-22T20:30:37Z,2021-03-22T20:30:37Z,OWNER,"I tried copying just the `mod_spatialite.so` file into a second stage build but it failed. So I ran `bash` in a working image and used `ldd` to figure out what it was linked to: ``` root@39683f91e588:/usr/lib/x86_64-linux-gnu# ldd mod_spatialite.so linux-vdso.so.1 (0x00007ffd021f4000) libxml2.so.2 => /usr/lib/x86_64-linux-gnu/libxml2.so.2 (0x00007f5c75412000) libpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0 (0x00007f5c753f0000) libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x00007f5c752ac000) libminizip.so.1 => /usr/lib/x86_64-linux-gnu/libminizip.so.1 (0x00007f5c750a0000) librttopo.so.1 => /usr/lib/x86_64-linux-gnu/librttopo.so.1 (0x00007f5c75028000) libfreexl.so.1 => /usr/lib/x86_64-linux-gnu/libfreexl.so.1 (0x00007f5c7501c000) libproj.so.19 => /usr/lib/x86_64-linux-gnu/libproj.so.19 (0x00007f5c74ca7000) libz.so.1 => /lib/x86_64-linux-gnu/libz.so.1 (0x00007f5c74a89000) libsqlite3.so.0 => /usr/lib/x86_64-linux-gnu/libsqlite3.so.0 (0x00007f5c74967000) libgeos_c.so.1 => /usr/lib/x86_64-linux-gnu/libgeos_c.so.1 (0x00007f5c7492b000) libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007f5c74766000) libdl.so.2 => /lib/x86_64-linux-gnu/libdl.so.2 (0x00007f5c74760000) libicuuc.so.67 => /usr/lib/x86_64-linux-gnu/libicuuc.so.67 (0x00007f5c74575000) liblzma.so.5 => /lib/x86_64-linux-gnu/liblzma.so.5 (0x00007f5c7454d000) /lib64/ld-linux-x86-64.so.2 (0x00007f5c75d49000) libtiff.so.5 => /usr/lib/x86_64-linux-gnu/libtiff.so.5 (0x00007f5c744c7000) libcurl-gnutls.so.4 => /usr/lib/x86_64-linux-gnu/libcurl-gnutls.so.4 (0x00007f5c74439000) libstdc++.so.6 => /usr/lib/x86_64-linux-gnu/libstdc++.so.6 (0x00007f5c7426c000) libgcc_s.so.1 => /lib/x86_64-linux-gnu/libgcc_s.so.1 (0x00007f5c74250000) libgeos-3.9.0.so => /usr/lib/x86_64-linux-gnu/libgeos-3.9.0.so (0x00007f5c74040000) libicudata.so.67 => /usr/lib/x86_64-linux-gnu/libicudata.so.67 (0x00007f5c72527000) libwebp.so.6 => /usr/lib/x86_64-linux-gnu/libwebp.so.6 (0x00007f5c724bc000) libzstd.so.1 => /usr/lib/x86_64-linux-gnu/libzstd.so.1 (0x00007f5c7241c000) libjbig.so.0 => /usr/lib/x86_64-linux-gnu/libjbig.so.0 (0x00007f5c7220e000) libjpeg.so.62 => /usr/lib/x86_64-linux-gnu/libjpeg.so.62 (0x00007f5c72188000) libdeflate.so.0 => /usr/lib/x86_64-linux-gnu/libdeflate.so.0 (0x00007f5c7216c000) libnghttp2.so.14 => /usr/lib/x86_64-linux-gnu/libnghttp2.so.14 (0x00007f5c72144000) libidn2.so.0 => /usr/lib/x86_64-linux-gnu/libidn2.so.0 (0x00007f5c72125000) librtmp.so.1 => /usr/lib/x86_64-linux-gnu/librtmp.so.1 (0x00007f5c71f08000) libssh2.so.1 => /usr/lib/x86_64-linux-gnu/libssh2.so.1 (0x00007f5c71eda000) libpsl.so.5 => /usr/lib/x86_64-linux-gnu/libpsl.so.5 (0x00007f5c71ec5000) libnettle.so.6 => /usr/lib/x86_64-linux-gnu/libnettle.so.6 (0x00007f5c71e8d000) libgnutls.so.30 => /usr/lib/x86_64-linux-gnu/libgnutls.so.30 (0x00007f5c71ce0000) libgssapi_krb5.so.2 => /usr/lib/x86_64-linux-gnu/libgssapi_krb5.so.2 (0x00007f5c71c93000) libkrb5.so.3 => /usr/lib/x86_64-linux-gnu/libkrb5.so.3 (0x00007f5c71bb3000) libk5crypto.so.3 => /usr/lib/x86_64-linux-gnu/libk5crypto.so.3 (0x00007f5c71b7f000) libcom_err.so.2 => /lib/x86_64-linux-gnu/libcom_err.so.2 (0x00007f5c71b77000) libldap_r-2.4.so.2 => /usr/lib/x86_64-linux-gnu/libldap_r-2.4.so.2 (0x00007f5c71b23000) liblber-2.4.so.2 => /usr/lib/x86_64-linux-gnu/liblber-2.4.so.2 (0x00007f5c71b12000) libunistring.so.2 => /usr/lib/x86_64-linux-gnu/libunistring.so.2 (0x00007f5c7198e000) libhogweed.so.4 => /usr/lib/x86_64-linux-gnu/libhogweed.so.4 (0x00007f5c71955000) libgmp.so.10 => /usr/lib/x86_64-linux-gnu/libgmp.so.10 (0x00007f5c718d0000) libgcrypt.so.20 => /lib/x86_64-linux-gnu/libgcrypt.so.20 (0x00007f5c717b2000) libp11-kit.so.0 => /usr/lib/x86_64-linux-gnu/libp11-kit.so.0 (0x00007f5c71683000) libtasn1.so.6 => /usr/lib/x86_64-linux-gnu/libtasn1.so.6 (0x00007f5c71470000) libkrb5support.so.0 => /usr/lib/x86_64-linux-gnu/libkrb5support.so.0 (0x00007f5c71461000) libkeyutils.so.1 => /lib/x86_64-linux-gnu/libkeyutils.so.1 (0x00007f5c71458000) libresolv.so.2 => /lib/x86_64-linux-gnu/libresolv.so.2 (0x00007f5c7143e000) libsasl2.so.2 => /usr/lib/x86_64-linux-gnu/libsasl2.so.2 (0x00007f5c71421000) libgpg-error.so.0 => /lib/x86_64-linux-gnu/libgpg-error.so.0 (0x00007f5c713fe000) libffi.so.6 => /usr/lib/x86_64-linux-gnu/libffi.so.6 (0x00007f5c713f4000) ```","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804368372,https://api.github.com/repos/simonw/datasette/issues/1249,804368372,MDEyOklzc3VlQ29tbWVudDgwNDM2ODM3Mg==,9599,simonw,2021-03-22T20:22:43Z,2021-03-22T20:22:43Z,OWNER,"```dockerfile FROM python:3.9.2-slim-buster as build # software-properties-common provides add-apt-repository RUN apt-get update && \ apt-get -y --no-install-recommends install software-properties-common && \ add-apt-repository ""deb http://httpredir.debian.org/debian sid main"" && \ apt-get update && \ apt-get -t sid install -y --no-install-recommends libsqlite3-mod-spatialite && \ apt clean && \ rm -rf /var/lib/apt && \ rm -rf /var/lib/dpkg RUN pip install datasette && \ find /usr/local/lib -name '__pycache__' | xargs rm -r && \ rm -rf /root/.cache/pip EXPOSE 8001 CMD [""datasette""] ``` 262 MB","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804363687,https://api.github.com/repos/simonw/datasette/issues/1249,804363687,MDEyOklzc3VlQ29tbWVudDgwNDM2MzY4Nw==,9599,simonw,2021-03-22T20:15:00Z,2021-03-22T20:15:00Z,OWNER,"``` RUN pip install datasette && \ find /usr/local/lib -name '__pycache__' | xargs rm -r ``` That dropped it to 265MB.","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804360701,https://api.github.com/repos/simonw/datasette/issues/1249,804360701,MDEyOklzc3VlQ29tbWVudDgwNDM2MDcwMQ==,9599,simonw,2021-03-22T20:10:07Z,2021-03-22T20:10:07Z,OWNER,Adding `--no-install-recommends` dropped it to 275MB,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804347152,https://api.github.com/repos/simonw/datasette/issues/1249,804347152,MDEyOklzc3VlQ29tbWVudDgwNDM0NzE1Mg==,9599,simonw,2021-03-22T19:47:56Z,2021-03-22T19:48:03Z,OWNER,I wrote a bunch of tips on creating smaller Docker images here: https://simonwillison.net/2018/Nov/19/smaller-python-docker-images/,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804344553,https://api.github.com/repos/simonw/datasette/issues/1249,804344553,MDEyOklzc3VlQ29tbWVudDgwNDM0NDU1Mw==,9599,simonw,2021-03-22T19:43:25Z,2021-03-22T19:43:25Z,OWNER,Does `--no-install-recommends` make a difference?,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804338678,https://api.github.com/repos/simonw/datasette/issues/1249,804338678,MDEyOklzc3VlQ29tbWVudDgwNDMzODY3OA==,9599,simonw,2021-03-22T19:33:43Z,2021-03-22T19:33:43Z,OWNER,"Replacing `rm -rf /var/lib/{apt,dpkg,cache,log}/` with ``` rm -rf /var/lib/apt && \ rm -rf /var/lib/dpkg ``` Got the size down to 305MB.","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804318314,https://api.github.com/repos/simonw/datasette/issues/1249,804318314,MDEyOklzc3VlQ29tbWVudDgwNDMxODMxNA==,9599,simonw,2021-03-22T19:04:30Z,2021-03-22T19:04:30Z,OWNER,Considering the image on Docker Hub right now is `383MB` this is actually an improvement.,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804317545,https://api.github.com/repos/simonw/datasette/issues/1249,804317545,MDEyOklzc3VlQ29tbWVudDgwNDMxNzU0NQ==,9599,simonw,2021-03-22T19:03:22Z,2021-03-22T19:03:22Z,OWNER,"This Dockerfile: ```dockerfile FROM python:3.9.2-slim-buster as build # software-properties-common provides add-apt-repository RUN apt-get update && \ apt-get -y install software-properties-common && \ add-apt-repository ""deb http://httpredir.debian.org/debian sid main"" && \ apt-get update && \ apt-get -t sid install -y libsqlite3-mod-spatialite && \ apt clean && \ rm -rf /var/lib/{apt,dpkg,cache,log}/ RUN pip install datasette EXPOSE 8001 CMD [""datasette""] ``` Produces a 344MB image that includes a working SpatiaLite 5.0 module. And weirdly... it doesn't exhibit the hanging bug!","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804310353,https://api.github.com/repos/simonw/datasette/issues/1249,804310353,MDEyOklzc3VlQ29tbWVudDgwNDMxMDM1Mw==,9599,simonw,2021-03-22T18:52:12Z,2021-03-22T18:52:12Z,OWNER,"This Dockerfile: ```dockerfile FROM python:3.9.2-slim-buster as build # Setup build dependencies RUN apt update \ && apt install -y python3-dev build-essential wget libxml2-dev libproj-dev \ libminizip-dev libgeos-dev libsqlite3-dev zlib1g-dev pkg-config git \ && apt clean RUN wget ""https://www.sqlite.org/2021/sqlite-autoconf-3340100.tar.gz"" && tar xzf sqlite-autoconf-3340100.tar.gz \ && cd sqlite-autoconf-3340100 && ./configure --disable-static --enable-fts5 --enable-json1 \ CFLAGS=""-g -O2 -DSQLITE_ENABLE_FTS3=1 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS4=1 -DSQLITE_ENABLE_RTREE=1 -DSQLITE_ENABLE_JSON1"" \ && make && make install RUN wget ""http://www.gaia-gis.it/gaia-sins/freexl-1.0.6.tar.gz"" && tar zxf freexl-1.0.6.tar.gz \ && cd freexl-1.0.6 && ./configure && make && make install RUN wget ""http://www.gaia-gis.it/gaia-sins/libspatialite-5.0.1.tar.gz"" && tar zxf libspatialite-5.0.1.tar.gz \ && cd libspatialite-5.0.1 && ./configure --disable-rttopo && make && make install RUN wget ""http://www.gaia-gis.it/gaia-sins/readosm-sources/readosm-1.1.0.tar.gz"" && tar zxf readosm-1.1.0.tar.gz && cd readosm-1.1.0 && ./configure && make && make install RUN wget ""http://www.gaia-gis.it/gaia-sins/spatialite-tools-5.0.0.tar.gz"" && tar zxf spatialite-tools-5.0.0.tar.gz \ && cd spatialite-tools-5.0.0 && ./configure --disable-rttopo && make && make install # Add local code to the image instead of fetching from pypi. #COPY . /datasette #RUN pip install /datasette RUN pip install datasette FROM python:3.9.2-slim-buster # Copy python dependencies and spatialite libraries COPY --from=build /usr/local/lib/ /usr/local/lib/ # Copy executables COPY --from=build /usr/local/bin /usr/local/bin # Copy spatial extensions COPY --from=build /usr/lib/x86_64-linux-gnu /usr/lib/x86_64-linux-gnu ENV LD_LIBRARY_PATH=/usr/local/lib EXPOSE 8001 CMD [""datasette""] ``` Produced a 448MB image.","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804309510,https://api.github.com/repos/simonw/datasette/issues/1249,804309510,MDEyOklzc3VlQ29tbWVudDgwNDMwOTUxMA==,9599,simonw,2021-03-22T18:50:50Z,2021-03-22T18:50:50Z,OWNER,"Ideally I'd like to use the Debian stable `python:3.9.2-slim-buster` base image but install SpatiaLite from Debian unstable here: https://packages.debian.org/sid/libspatialite7 This pattern might let me do that: https://github.com/helmesjo/cpp_bash_utils/blob/f031e926249f8e2d7f260f22dc8974c6d5be11fe/docker/images/linux-gcc.dockerfile#L20-L24","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-804263434,https://api.github.com/repos/simonw/datasette/issues/1249,804263434,MDEyOklzc3VlQ29tbWVudDgwNDI2MzQzNA==,9599,simonw,2021-03-22T17:43:25Z,2021-03-22T17:43:25Z,OWNER,I figured out the cause of the hang in #1268 - it was caused by `select count(*) from SpatialIndex` interacting badly with the `set_progress_handler()` mechanism I was using to implement query time limits. #1271 has a replacement for that using `asyncio.wait_for()` and `conn.interrupt()` which should resolve the SpatiaLite issue too.,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803755698,https://api.github.com/repos/simonw/datasette/issues/1249,803755698,MDEyOklzc3VlQ29tbWVudDgwMzc1NTY5OA==,9599,simonw,2021-03-22T04:43:02Z,2021-03-22T04:43:02Z,OWNER,I'll spin off a separate ticket to investigate the hang.,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803753388,https://api.github.com/repos/simonw/datasette/issues/1249,803753388,MDEyOklzc3VlQ29tbWVudDgwMzc1MzM4OA==,9599,simonw,2021-03-22T04:34:20Z,2021-03-22T04:35:10Z,OWNER,"Well this is frustrating. I finally found a Dockerfile that worked and installed an Ubuntu pre-compiled SpatiaLite module that would load... ```dockerfile FROM ubuntu:20.10 as install_spatialite RUN apt update && \ apt install -y libsqlite3-mod-spatialite && \ apt clean && \ rm -rf /var/lib/{apt,dpkg,cache,log}/ FROM ubuntu:20.10 RUN apt update && \ apt install -y python3-pip && \ apt clean && \ rm -rf /var/lib/{apt,dpkg,cache,log}/ RUN pip install datasette # Copy spatial extensions COPY --from=install_spatialite /usr/lib/x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/ ENV LD_LIBRARY_PATH=/usr/local/lib EXPOSE 8001 CMD [""datasette""] ``` (Which produced a 550MB image) And when I ran Datasette I got that same error where the database listing page hangs! ``` docker run -p 8001:8001 -v `pwd`:/mnt datasette-spatialite:latest datasette -p 8001 -h 0.0.0.0 /mnt/tuscany_housenumbers.sqlite --load-extension=spatialite ```","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803751068,https://api.github.com/repos/simonw/datasette/issues/1249,803751068,MDEyOklzc3VlQ29tbWVudDgwMzc1MTA2OA==,9599,simonw,2021-03-22T04:26:45Z,2021-03-22T04:26:45Z,OWNER,"Here's why: ``` datasette % docker run -it -p 8001:8001 -v `pwd`:/mnt datasette-spatialite:latest bash root@3430352ff378:/# datasette bash: /usr/local/bin/datasette: /usr/bin/python3: bad interpreter: No such file or directory ```","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803750617,https://api.github.com/repos/simonw/datasette/issues/1249,803750617,MDEyOklzc3VlQ29tbWVudDgwMzc1MDYxNw==,9599,simonw,2021-03-22T04:25:14Z,2021-03-22T04:25:14Z,OWNER,"Got this error attempting to run Datasette (with or without SpatiaLite): ``` standard_init_linux.go:219: exec user process caused: no such file or directory ``` ","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803750399,https://api.github.com/repos/simonw/datasette/issues/1249,803750399,MDEyOklzc3VlQ29tbWVudDgwMzc1MDM5OQ==,9599,simonw,2021-03-22T04:24:25Z,2021-03-22T04:24:25Z,OWNER,"I'll try using `ubuntu:20.10` for everything: ```dockerfile FROM ubuntu:20.10 as install_spatialite RUN apt update && \ apt install -y libsqlite3-mod-spatialite && \ apt clean && \ rm -rf /var/lib/{apt,dpkg,cache,log}/ FROM ubuntu:20.10 as build RUN apt update && \ apt install -y python3-pip && \ apt clean && \ rm -rf /var/lib/{apt,dpkg,cache,log}/ RUN pip install datasette #COPY . /datasette #RUN pip install /datasette FROM ubuntu:20.10 # Copy python dependencies and spatialite libraries COPY --from=build /usr/local/lib/ /usr/local/lib/ # Copy executables COPY --from=build /usr/local/bin /usr/local/bin # Copy spatial extensions COPY --from=install_spatialite /usr/lib/x86_64-linux-gnu/mod_spatialite.so /usr/lib/x86_64-linux-gnu/mod_spatialite.so ENV LD_LIBRARY_PATH=/usr/local/lib EXPOSE 8001 CMD [""datasette""] ```","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803749831,https://api.github.com/repos/simonw/datasette/issues/1249,803749831,MDEyOklzc3VlQ29tbWVudDgwMzc0OTgzMQ==,9599,simonw,2021-03-22T04:22:35Z,2021-03-22T04:22:35Z,OWNER,"I tried copying just the `mod_spatialite.so` file: ```dockerfile FROM ubuntu:20.10 as install_spatialite RUN apt update && \ apt install -y libsqlite3-mod-spatialite && \ apt clean && \ rm -rf /var/lib/{apt,dpkg,cache,log}/ FROM python:3.9.2-slim as build RUN pip install datasette #COPY . /datasette #RUN pip install /datasette FROM python:3.9.2-slim # Copy python dependencies and spatialite libraries COPY --from=build /usr/local/lib/ /usr/local/lib/ # Copy executables COPY --from=build /usr/local/bin /usr/local/bin # Copy spatial extensions COPY --from=install_spatialite /usr/lib/x86_64-linux-gnu/mod_spatialite.so /usr/lib/x86_64-linux-gnu/mod_spatialite.so ENV LD_LIBRARY_PATH=/usr/local/lib EXPOSE 8001 CMD [""datasette""] ``` But when I ran Datasette with `--load-extension=spatialite` I got this: ``` File ""/usr/local/lib/python3.9/site-packages/datasette/database.py"", line 151, in in_thread self.ds._prepare_connection(conn, self.name) File ""/usr/local/lib/python3.9/site-packages/datasette/app.py"", line 502, in _prepare_connection conn.execute(f""SELECT load_extension('{extension}')"") sqlite3.OperationalError: /usr/lib/x86_64-linux-gnu/mod_spatialite.so.so: cannot open shared object file: No such file or directory ```","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803748469,https://api.github.com/repos/simonw/datasette/issues/1249,803748469,MDEyOklzc3VlQ29tbWVudDgwMzc0ODQ2OQ==,9599,simonw,2021-03-22T04:17:51Z,2021-03-22T04:17:51Z,OWNER,"... except my clever image using SpatiaLite installed for Ubuntu doesn't actually work: ``` datasette % docker run -p 8001:8001 -v `pwd`:/mnt datasette-spatialite:latest datasette -p 8001 -h 0.0.0.0 /mnt/fixtures.db File ""/usr/local/lib/python3.9/sqlite3/dbapi2.py"", line 27, in from _sqlite3 import * ImportError: /lib/x86_64-linux-gnu/libm.so.6: version `GLIBC_2.29' not found (required by /usr/lib/x86_64-linux-gnu/libsqlite3.so.0) ```","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803748158,https://api.github.com/repos/simonw/datasette/issues/1249,803748158,MDEyOklzc3VlQ29tbWVudDgwMzc0ODE1OA==,9599,simonw,2021-03-22T04:16:57Z,2021-03-22T04:16:57Z,OWNER,"Which is great, because the image on Docker Hub right now is 383MB.","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803747701,https://api.github.com/repos/simonw/datasette/issues/1249,803747701,MDEyOklzc3VlQ29tbWVudDgwMzc0NzcwMQ==,9599,simonw,2021-03-22T04:15:40Z,2021-03-22T04:15:40Z,OWNER,"Here's a trick: install SpatiaLite in `ubuntu:20.10` and then copy it into the final `python:3.9.2-slim` image. ```dockerfile FROM ubuntu:20.10 as install_spatialite RUN apt update && \ apt install -y libsqlite3-mod-spatialite && \ apt clean && \ rm -rf /var/lib/{apt,dpkg,cache,log}/ FROM python:3.9.2-slim as build RUN pip install datasette #COPY . /datasette #RUN pip install /datasette FROM python:3.9.2-slim # Copy python dependencies and spatialite libraries COPY --from=build /usr/local/lib/ /usr/local/lib/ # Copy executables COPY --from=build /usr/local/bin /usr/local/bin # Copy spatial extensions COPY --from=install_spatialite /usr/lib/x86_64-linux-gnu /usr/lib/x86_64-linux-gnu ENV LD_LIBRARY_PATH=/usr/local/lib EXPOSE 8001 CMD [""datasette""] ``` That produced a 265MB image.","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803700940,https://api.github.com/repos/simonw/datasette/issues/1249,803700940,MDEyOklzc3VlQ29tbWVudDgwMzcwMDk0MA==,9599,simonw,2021-03-22T01:14:24Z,2021-03-22T01:14:24Z,OWNER,I tried that with just `python3-pip` (removing `libsqlite3-mod-spatialite`) and got 435MB.,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803700626,https://api.github.com/repos/simonw/datasette/issues/1249,803700626,MDEyOklzc3VlQ29tbWVudDgwMzcwMDYyNg==,9599,simonw,2021-03-22T01:13:04Z,2021-03-22T01:13:04Z,OWNER,"Building a Dockerfile containing just `FROM ubuntu:20.10` gave me `79.5MB`. Building this one: ```dockerfile FROM ubuntu:20.10 # Setup build dependencies RUN apt update && \ apt install -y python3-pip libsqlite3-mod-spatialite && \ apt clean && \ rm -rf /var/lib/{apt,dpkg,cache,log}/ ``` Resulted in a 515MB image.","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803698983,https://api.github.com/repos/simonw/datasette/issues/1249,803698983,MDEyOklzc3VlQ29tbWVudDgwMzY5ODk4Mw==,9599,simonw,2021-03-22T01:05:36Z,2021-03-22T01:06:23Z,OWNER,"It's pretty big though. I tried this version which avoids copying junk from my laptop in: ```dockerfile FROM ubuntu:20.10 # Setup build dependencies RUN apt update && apt install -y python3-pip libsqlite3-mod-spatialite && apt clean RUN pip install datasette EXPOSE 8001 CMD [""datasette""] ``` And got this: ``` datasette % docker images datasette-spatialite REPOSITORY TAG IMAGE ID CREATED SIZE datasette-spatialite latest 0796950653c2 2 seconds ago 528MB ```","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803698168,https://api.github.com/repos/simonw/datasette/issues/1249,803698168,MDEyOklzc3VlQ29tbWVudDgwMzY5ODE2OA==,9599,simonw,2021-03-22T01:02:02Z,2021-03-22T01:02:30Z,OWNER,"This is the shortest Dockerfile that appeared to give me a working SpatiaLite module: ```dockerfile FROM ubuntu:20.10 # Setup build dependencies RUN apt update && apt install -y python3-pip libsqlite3-mod-spatialite && apt clean # Add local code to the image instead of fetching from pypi. COPY . /datasette RUN pip install /datasette RUN rm -rf /datasette EXPOSE 8001 CMD [""datasette""] ```","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803697546,https://api.github.com/repos/simonw/datasette/issues/1249,803697546,MDEyOklzc3VlQ29tbWVudDgwMzY5NzU0Ng==,9599,simonw,2021-03-22T00:59:47Z,2021-03-22T00:59:47Z,OWNER,"To debug I'm running: docker run -it -p 8001:8001 -v `pwd`:/mnt datasette-spatialite:latest bash This gets me a shell I can use.","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803697211,https://api.github.com/repos/simonw/datasette/issues/1249,803697211,MDEyOklzc3VlQ29tbWVudDgwMzY5NzIxMQ==,9599,simonw,2021-03-22T00:58:01Z,2021-03-22T00:58:01Z,OWNER,"I'm messing around with the `Dockerfile` and after each change I'm running: docker build . -t datasette-spatialite And then: docker run -p 8001:8001 -v `pwd`:/mnt datasette-spatialite:latest datasette -p 8001 -h 0.0.0.0 /mnt/fixtures.db ","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803694661,https://api.github.com/repos/simonw/datasette/issues/1249,803694661,MDEyOklzc3VlQ29tbWVudDgwMzY5NDY2MQ==,9599,simonw,2021-03-22T00:46:49Z,2021-03-22T00:46:49Z,OWNER,Actually for the loadable module I think I need https://packages.ubuntu.com/groovy/libsqlite3-mod-spatialite,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803694436,https://api.github.com/repos/simonw/datasette/issues/1249,803694436,MDEyOklzc3VlQ29tbWVudDgwMzY5NDQzNg==,9599,simonw,2021-03-22T00:46:00Z,2021-03-22T00:46:00Z,OWNER,So I'm going to try `20.10` and see where that gets me.,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803694359,https://api.github.com/repos/simonw/datasette/issues/1249,803694359,MDEyOklzc3VlQ29tbWVudDgwMzY5NDM1OQ==,9599,simonw,2021-03-22T00:45:47Z,2021-03-22T00:45:47Z,OWNER,https://pythonspeed.com/articles/base-image-python-docker-images/ suggests using `python:3.9-slim-buster` or `ubuntu:20.04` - but 20.04 is focal which still has SpatiaLite `4.3.0a-6build1` - It's `20.10` that has 5.0: https://packages.ubuntu.com/groovy/libspatialite-dev,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803693181,https://api.github.com/repos/simonw/datasette/issues/1249,803693181,MDEyOklzc3VlQ29tbWVudDgwMzY5MzE4MQ==,9599,simonw,2021-03-22T00:41:02Z,2021-03-22T00:41:02Z,OWNER,Debian sid has it too: https://packages.debian.org/sid/libspatialite-dev,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803692673,https://api.github.com/repos/simonw/datasette/issues/1249,803692673,MDEyOklzc3VlQ29tbWVudDgwMzY5MjY3Mw==,9599,simonw,2021-03-22T00:38:42Z,2021-03-22T00:38:42Z,OWNER,Ubuntu Groovy has a package for SpatiaLite 5 - I could try using that instead: https://packages.ubuntu.com/groovy/libspatialite-dev,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-803691236,https://api.github.com/repos/simonw/datasette/issues/1249,803691236,MDEyOklzc3VlQ29tbWVudDgwMzY5MTIzNg==,9599,simonw,2021-03-22T00:32:03Z,2021-03-22T00:32:03Z,OWNER,"Here's something odd: when I run `datasette tuscany_housenumbers.sqlite --load-extension=spatialite` on macOS against SpatiaLite installed using Homebrew (which reports `""spatialite"": ""5.0.0""` on the `/-/versions` page) I don't get any weird errors at all, everything works fine. But when I tried compiling SpatiaLite inside the Docker container I had hanging errors on some pages. This is using https://www.gaia-gis.it/gaia-sins/knn/tuscany_housenumbers.7z from the SpatiaLite KNN tutorial at https://www.gaia-gis.it/fossil/libspatialite/wiki?name=KNN","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-792384854,https://api.github.com/repos/simonw/datasette/issues/1249,792384854,MDEyOklzc3VlQ29tbWVudDc5MjM4NDg1NA==,9599,simonw,2021-03-08T00:23:38Z,2021-03-08T00:23:38Z,OWNER,One reason to prioritize this issue: Homebrew upgraded to SpatiaLite 5.0 recently https://formulae.brew.sh/formula/spatialite-tools and as a result SpatiaLite database created on my laptop don't appear to be compatible with Datasette when published using `datasette publish`.,"{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-792384382,https://api.github.com/repos/simonw/datasette/issues/1249,792384382,MDEyOklzc3VlQ29tbWVudDc5MjM4NDM4Mg==,9599,simonw,2021-03-08T00:22:02Z,2021-03-08T00:22:02Z,OWNER,"I tried this patch against `Dockerfile`: ```diff diff --git a/Dockerfile b/Dockerfile index f4b1414..dd659e1 100644 --- a/Dockerfile +++ b/Dockerfile @@ -1,25 +1,26 @@ -FROM python:3.7.10-slim-stretch as build +FROM python:3.9.2-slim-buster as build # Setup build dependencies RUN apt update \ -&& apt install -y python3-dev build-essential wget libxml2-dev libproj-dev libgeos-dev libsqlite3-dev zlib1g-dev pkg-config git \ - && apt clean + && apt install -y python3-dev build-essential wget libxml2-dev libproj-dev \ + libminizip-dev libgeos-dev libsqlite3-dev zlib1g-dev pkg-config git \ + && apt clean - -RUN wget ""https://www.sqlite.org/2020/sqlite-autoconf-3310100.tar.gz"" && tar xzf sqlite-autoconf-3310100.tar.gz \ - && cd sqlite-autoconf-3310100 && ./configure --disable-static --enable-fts5 --enable-json1 CFLAGS=""-g -O2 -DSQLITE_ENABLE_FTS3=1 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS4=1 -DSQLITE_ENABLE_RTREE=1 -DSQLITE_ENABLE_JSON1"" \ +RUN wget ""https://www.sqlite.org/2021/sqlite-autoconf-3340100.tar.gz"" && tar xzf sqlite-autoconf-3340100.tar.gz \ + && cd sqlite-autoconf-3340100 && ./configure --disable-static --enable-fts5 --enable-json1 \ + CFLAGS=""-g -O2 -DSQLITE_ENABLE_FTS3=1 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS4=1 -DSQLITE_ENABLE_RTREE=1 -DSQLITE_ENABLE_JSON1"" \ && make && make install -RUN wget ""http://www.gaia-gis.it/gaia-sins/freexl-sources/freexl-1.0.5.tar.gz"" && tar zxf freexl-1.0.5.tar.gz \ - && cd freexl-1.0.5 && ./configure && make && make install +RUN wget ""http://www.gaia-gis.it/gaia-sins/freexl-1.0.6.tar.gz"" && tar zxf freexl-1.0.6.tar.gz \ + && cd freexl-1.0.6 && ./configure && make && make install -RUN wget ""http://www.gaia-gis.it/gaia-sins/libspatialite-sources/libspatialite-4.4.0-RC0.tar.gz"" && tar zxf libspatialite-4.4.0-RC0.tar.gz \ - && cd libspatialite-4.4.0-RC0 && ./configure && make && make install +RUN wget ""http://www.gaia-gis.it/gaia-sins/libspatialite-5.0.1.tar.gz"" && tar zxf libspatialite-5.0.1.tar.gz \ + && cd libspatialite-5.0.1 && ./configure --disable-rttopo && make && make install RUN wget ""http://www.gaia-gis.it/gaia-sins/readosm-sources/readosm-1.1.0.tar.gz"" && tar zxf readosm-1.1.0.tar.gz && cd readosm-1.1.0 && ./configure && make && make install -RUN wget ""http://www.gaia-gis.it/gaia-sins/spatialite-tools-sources/spatialite-tools-4.4.0-RC0.tar.gz"" && tar zxf spatialite-tools-4.4.0-RC0.tar.gz \ - && cd spatialite-tools-4.4.0-RC0 && ./configure && make && make install +RUN wget ""http://www.gaia-gis.it/gaia-sins/spatialite-tools-5.0.0.tar.gz"" && tar zxf spatialite-tools-5.0.0.tar.gz \ + && cd spatialite-tools-5.0.0 && ./configure --disable-rttopo && make && make install # Add local code to the image instead of fetching from pypi. @@ -27,7 +28,7 @@ COPY . /datasette RUN pip install /datasette -FROM python:3.7.10-slim-stretch +FROM python:3.9.2-slim-buster # Copy python dependencies and spatialite libraries COPY --from=build /usr/local/lib/ /usr/local/lib/ ``` I had to use `--disable-rttopo` from the tip in https://github.com/OSGeo/gdal/pull/3443 and also needed to install `libminizip-dev`. This works, sort of... I'm getting a weird issue where the `/dbname` page is hanging some of the time instead of loading correctly. Other than that it seems to work, but a hanging page is bad!","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0, https://github.com/simonw/datasette/issues/1249#issuecomment-792383956,https://api.github.com/repos/simonw/datasette/issues/1249,792383956,MDEyOklzc3VlQ29tbWVudDc5MjM4Mzk1Ng==,9599,simonw,2021-03-08T00:20:09Z,2021-03-08T00:20:09Z,OWNER,"Worth noting that the Docker image used by `datasette publish cloudrun` doesn't actually use that Datasette docker image - it does this: https://github.com/simonw/datasette/blob/d0fd833b8cdd97e1b91d0f97a69b494895d82bee/datasette/utils/__init__.py#L349-L353 Where the apt extras for SpatiaLite are: https://github.com/simonw/datasette/blob/d0fd833b8cdd97e1b91d0f97a69b494895d82bee/datasette/utils/__init__.py#L344-L345 `libsqlite3-mod-spatialite` against that official `python:3.8` image doesn't appear to install SpatiaLite 5.0. ","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",824064069,Updated Dockerfile with SpatiaLite version 5.0,