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  • simonw · 2 ✖

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  • Figure out some interesting example SQL queries · 2 ✖

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id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions issue performed_via_github_app
544648863 https://github.com/dogsheep/genome-to-sqlite/issues/1#issuecomment-544648863 https://api.github.com/repos/dogsheep/genome-to-sqlite/issues/1 MDEyOklzc3VlQ29tbWVudDU0NDY0ODg2Mw== simonw 9599 2019-10-21T18:36:03Z 2019-10-21T18:36:03Z MEMBER 

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 Figure out some interesting example SQL queries 496415321  
544646516 https://github.com/dogsheep/genome-to-sqlite/issues/1#issuecomment-544646516 https://api.github.com/repos/dogsheep/genome-to-sqlite/issues/1 MDEyOklzc3VlQ29tbWVudDU0NDY0NjUxNg== simonw 9599 2019-10-21T18:30:14Z 2019-10-21T18:30:14Z MEMBER

Thanks to help from Dr. Laura Cantino at Science Hack Day San Francisco I've been able to pull together this query:

sql select rsid, genotype, case genotype when 'AA' then 'brown eye color, 80% of the time' when 'AG' then 'brown eye color' when 'GG' then 'blue eye color, 99% of the time' end as interpretation from genome where rsid = 'rs12913832'

See also https://www.snpedia.com/index.php/Rs12913832 - in particular this table:

 
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 Figure out some interesting example SQL queries 496415321  

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