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id | node_id | number | title | user | state | locked | assignee | milestone | comments | created_at | updated_at ▲ | closed_at | author_association | pull_request | body | repo | type | active_lock_reason | performed_via_github_app | reactions | draft | state_reason |
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1224112817 | I_kwDOCGYnMM5I9nqx | 430 | Document how to use `PRAGMA temp_store` to avoid errors when running VACUUM against huge databases | rayvoelker 9308268 | open | 0 | 2 | 2022-05-03T13:33:58Z | 2022-06-14T23:26:37Z | NONE | I'm trying to figure out a way to get the Here's the bit that's causing the error, and the resulting error output: ```python combine these columns into 1 table "bib_properties" :best_titlebib_level_codemat_typematerial_codebest_authordb["circ_trans"].extract( ["best_title", "bib_level_code", "mat_type", "material_code", "best_author"], table="bib_properties", fk_column="bib_properties_id" ) db["circ_trans"].extract( ["call_number"], table="call_number", fk_column="call_number_id", rename={"call_number": "value"} ) ``` ```pythonOperationalError Traceback (most recent call last) Input In [17], in <cell line: 7>() 1 # combine these columns into 1 table "bib_properties" : 2 # best_title 3 # bib_level_code 4 # mat_type 5 # material_code 6 # best_author ----> 7 db["circ_trans"].extract( 8 ["best_title", "bib_level_code", "mat_type", "material_code", "best_author"], 9 table="bib_properties", 10 fk_column="bib_properties_id" 11 ) 13 db["circ_trans"].extract( 14 ["call_number"], 15 table="call_number", 16 fk_column="call_number_id", 17 rename={"call_number": "value"} 18 ) File ~/jupyter/venv/lib/python3.10/site-packages/sqlite_utils/db.py:1764, in Table.extract(self, columns, table, fk_column, rename) 1761 column_order.append(c.name) 1763 # Drop the unnecessary columns and rename lookup column -> 1764 self.transform( 1765 drop=set(columns), 1766 rename={magic_lookup_column: fk_column}, 1767 column_order=column_order, 1768 ) 1770 # And add the foreign key constraint 1771 self.add_foreign_key(fk_column, table, "id") File ~/jupyter/venv/lib/python3.10/site-packages/sqlite_utils/db.py:1526, in Table.transform(self, types, rename, drop, pk, not_null, defaults, drop_foreign_keys, column_order) 1524 with self.db.conn: 1525 for sql in sqls: -> 1526 self.db.execute(sql) 1527 # Run the foreign_key_check before we commit 1528 if pragma_foreign_keys_was_on: File ~/jupyter/venv/lib/python3.10/site-packages/sqlite_utils/db.py:465, in Database.execute(self, sql, parameters) 463 return self.conn.execute(sql, parameters) 464 else: --> 465 return self.conn.execute(sql) OperationalError: database or disk is full ``` This database is about 17G in total size, so I'm assuming the error is coming from the vacuum ... where i'm assuming it's maybe trying to do the temp storage in a location that doesn't have sufficient room. The disk space is more than ample on the host in question (1.8T is free in the directory where the sqlite db resides) The I'm trying to think if there's a way to set the ```python SET the temp file store to be a file ...print(db.execute('PRAGMA temp_store').fetchall()) print(db.execute('PRAGMA temp_store=FILE').fetchall()) print(db.execute('PRAGMA temp_store').fetchall()) the users home directory ...print(db.execute("PRAGMA temp_store_directory='/home/plchuser/'").fetchall()) print(db.execute("PRAGMA sqlite3_temp_directory='/home/plchuser/'").fetchall()) print(db.execute("PRAGMA temp_store_directory").fetchall())
print(db.execute("PRAGMA sqlite3_temp_directory").fetchall())
Here's the docs on the Temporary File Storage Locations https://www.sqlite.org/tempfiles.html |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/430/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1243151184 | I_kwDOCGYnMM5KGPtQ | 434 | `detect_fts()` identifies the wrong table if tables have names that are subsets of each other | ryascott 559711 | closed | 0 | 3 | 2022-05-20T13:28:31Z | 2022-06-14T23:24:09Z | 2022-06-14T23:24:09Z | NONE | Windows 10 Python 3.9.6 When I was running a full text search through the Python library, I noticed that the query was being run on a different full text search table than the one I was trying to search. I took a look at the following function and noticed:
My database contains tables with similar names and %{table}% was matching another table that ended differently in its name. I have included a sample test that shows this occurring: I search for Marsupials in db["books"] and The Clue of the Broken Blade is returned. This occurs since the search for Marsupials was "successfully" done against db["booksb"] and rowid 1 is returned. "The Clue of the Broken Blade" has a rowid of 1 in db["books"] and this is what is returned from the search. ```python def test_fts_search_with_similar_table_names(fresh_db): db = Database(memory=True) db["books"].insert_all( [ { "title": "The Clue of the Broken Blade", "author": "Franklin W. Dixon", }, { "title": "Habits of Australian Marsupials", "author": "Marlee Hawkins", }, ] ) db["booksb"].insert( { "title": "Habits of Australian Marsupials", "author": "Marlee Hawkins", } )
``` |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/434/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1250629388 | I_kwDOCGYnMM5KixcM | 440 | CSV files with too many values in a row cause errors | frafra 4068 | closed | 0 | 20 | 2022-05-27T10:54:44Z | 2022-06-14T22:23:01Z | 2022-06-14T20:12:46Z | NONE | Original title: csv.DictReader can have None as key In some cases, ```python url="https://artsdatabanken.no/Fab2018/api/export/csv" db = sqlite_utils.Database(":memory") with urlopen(url) as fab:
reader, _ = sqlite_utils.utils.rows_from_file(fab, encoding="utf-16le") Result:
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sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/440/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1236693079 | I_kwDOCGYnMM5JtnBX | 432 | Support `rows_where()`, `delete_where()` etc for attached alias databases | luxint 11597658 | open | 0 | 5 | 2022-05-16T06:38:58Z | 2022-06-14T22:16:48Z | NONE | Hi, I noticed Besides, |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/432/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1257724585 | I_kwDOCGYnMM5K91qp | 441 | Combining `rows_where()` and `search()` to limit which rows are searched | betatim 1448859 | closed | 0 | 4 | 2022-06-02T06:01:55Z | 2022-06-14T21:57:57Z | 2022-06-14T21:54:38Z | NONE | What is the right way to limit a full text search query to some rows of a table? For example, I have a table that contains the following columns: I tried to combine My two questions:
1. is adding a Right now I am thinking I will make my own version of Bonus question: is this generally useful/something to add to sqlite-utils or too niche? |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/441/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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