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  • inaturalist-to-sqlite · 2 ✖
id node_id number title user state locked assignee milestone comments created_at updated_at ▲ closed_at author_association pull_request body repo type active_lock_reason performed_via_github_app reactions draft state_reason
1485017981 I_kwDODEpn8M5Yg5N9 2 table identifications has no column named previous_observation_taxon heaversm 520541 open 0     0 2022-12-08T16:47:17Z 2022-12-08T16:47:17Z   NONE  

Installed successfully with pip and ran inaturalist-to-sqlite inaturalist.db simonw and got the error:

sqlite3.OperationalError: table identifications has no column named previous_observation_taxon

 inaturalist-to-sqlite 206202864 issue     
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1353411865 I_kwDODEpn8M5Qq20Z 1 Problem with my user fernand0 2467 open 0     0 2022-08-28T16:59:37Z 2022-08-28T16:59:37Z   NONE  

If I call the program with: inaturalist-to-sqlite inaturalist.db ftricas the program exits with an error: Importing 36 observations Traceback (most recent call last): File "/home/ftricas/.pyenv/versions/3.10.6/bin/inaturalist-to-sqlite", line 8, in <module> sys.exit(cli()) File "/home/ftricas/.pyenv/versions/3.10.6/lib/python3.10/site-packages/click/core.py", line 1130, in __call__ return self.main(*args, **kwargs) File "/home/ftricas/.pyenv/versions/3.10.6/lib/python3.10/site-packages/click/core.py", line 1055, in main rv = self.invoke(ctx) File "/home/ftricas/.pyenv/versions/3.10.6/lib/python3.10/site-packages/click/core.py", line 1404, in invoke return ctx.invoke(self.callback, **ctx.params) File "/home/ftricas/.pyenv/versions/3.10.6/lib/python3.10/site-packages/click/core.py", line 760, in invoke return __callback(*args, **kwargs) File "/home/ftricas/.pyenv/versions/3.10.6/lib/python3.10/site-packages/inaturalist_to_sqlite/cli.py", line 51, in cli save_observation(observation, db) File "/home/ftricas/.pyenv/versions/3.10.6/lib/python3.10/site-packages/inaturalist_to_sqlite/utils.py", line 34, in save_observation db["observations"] File "/home/ftricas/.pyenv/versions/3.10.6/lib/python3.10/site-packages/sqlite_utils/db.py", line 2965, in insert return self.insert_all( File "/home/ftricas/.pyenv/versions/3.10.6/lib/python3.10/site-packages/sqlite_utils/db.py", line 3068, in insert_all self.create( File "/home/ftricas/.pyenv/versions/3.10.6/lib/python3.10/site-packages/sqlite_utils/db.py", line 1564, in create self.db.create_table( File "/home/ftricas/.pyenv/versions/3.10.6/lib/python3.10/site-packages/sqlite_utils/db.py", line 951, in create_table sql = self.create_table_sql( File "/home/ftricas/.pyenv/versions/3.10.6/lib/python3.10/site-packages/sqlite_utils/db.py", line 765, in create_table_sql foreign_keys = self.resolve_foreign_keys(name, foreign_keys or []) File "/home/ftricas/.pyenv/versions/3.10.6/lib/python3.10/site-packages/sqlite_utils/db.py", line 702, in resolve_foreign_keys other_table = table.guess_foreign_table(column) File "/home/ftricas/.pyenv/versions/3.10.6/lib/python3.10/site-packages/sqlite_utils/db.py", line 2061, in guess_foreign_table raise NoObviousTable( sqlite_utils.db.NoObviousTable: No obvious foreign key table for column 'taxon' - tried ['taxon', 'taxons'] If I call the program with your user everything seems to go well and then, I can call the program with my own user without problems. Moreover, I can call the program again with my own user and everything goes well now.

Additional info, the command:

sqlite-utils tables inaturalist.db

shows that the correct name can be 'taxons'.

There is another small problem with a warning:

warnings.warn("urllib3 ({}) or chardet ({})/charset_normalizer ({}) doesn't match a supported "

 inaturalist-to-sqlite 206202864 issue     
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