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id | node_id | number | title | user | state | locked | assignee | milestone | comments | created_at | updated_at ▲ | closed_at | author_association | pull_request | body | repo | type | active_lock_reason | performed_via_github_app | reactions | draft | state_reason |
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1128466114 | I_kwDOCGYnMM5DQwbC | 406 | Creating tables with custom datatypes | psychemedia 82988 | open | 0 | 5 | 2022-02-09T12:16:31Z | 2022-09-15T18:13:50Z | NONE | Via https://stackoverflow.com/a/18622264/454773 I note the ability to register custom handlers for novel datatypes that can map into and out of things like sqlite From a quick look and a quick play, I didn't spot a way to do this in For example: ```python Via https://stackoverflow.com/a/18622264/454773import sqlite3 import numpy as np import io def adapt_array(arr): """ http://stackoverflow.com/a/31312102/190597 (SoulNibbler) """ out = io.BytesIO() np.save(out, arr) out.seek(0) return sqlite3.Binary(out.read()) def convert_array(text): out = io.BytesIO(text) out.seek(0) return np.load(out) Converts np.array to TEXT when insertingsqlite3.register_adapter(np.ndarray, adapt_array) Converts TEXT to np.array when selectingsqlite3.register_converter("array", convert_array) ``` ```python from sqlite_utils import Database db = Database('test.db') Reset the database connection to used the parsed datatypesqlite_utils doesn't seem to support eg:Database('test.db', detect_types=sqlite3.PARSE_DECLTYPES)db.conn = sqlite3.connect(db_name, detect_types=sqlite3.PARSE_DECLTYPES) Create a table the old fashioned waybut using the new custom data typevector_table_create = """ CREATE TABLE dummy (title TEXT, vector array ); """ cur = db.conn.cursor() cur.execute(vector_table_create) sqlite_utils doesn't appear to support custom types (yet?!)The following errors on the "array" datatype""" db["dummy"].create({ "title": str, "vector": "array", }) """ ``` We can then add / retrieve records from the database where the datatype of the ```python import numpy as np db["dummy"].insert({'title':"test1", 'vector':np.array([1,2,3])}) for row in db.query("SELECT * FROM dummy"): print(row['title'], row['vector'], type(row['vector'])) """ test1 [1 2 3] <class 'numpy.ndarray'> """ ``` It would be handy to be able to do this idiomatically in |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/406/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1063388037 | I_kwDOCGYnMM4_YgOF | 343 | Provide function to generate hash_id from specified columns | psychemedia 82988 | closed | 0 | 4 | 2021-11-25T10:12:12Z | 2022-03-02T04:25:25Z | 2022-03-02T04:25:25Z | NONE | Hi I note that you define It would be useful to be able to call a complementary function to generate a corresponding Or is there a better pattern for doing that? |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/343/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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545407916 | MDU6SXNzdWU1NDU0MDc5MTY= | 73 | upsert_all() throws issue when upserting to empty table | psychemedia 82988 | closed | 0 | 6 | 2020-01-05T11:58:57Z | 2020-01-31T14:21:09Z | 2020-01-05T17:20:18Z | NONE | If I try to add a list of ```python import sqlite3 from sqlite_utils import Database import pandas as pd conx = sqlite3.connect(':memory') cx = conx.cursor() cx.executescript('CREATE TABLE "test" ("Col1" TEXT);') q="SELECT * FROM test;" pd.read_sql(q, conx) #shows empty table db = Database(conx) db['test'].upsert_all([{'Col1':'a'},{'Col1':'b'}]) TypeError Traceback (most recent call last) <ipython-input-74-8c26d93d7587> in <module> 1 db = Database(conx) ----> 2 db['test'].upsert_all([{'Col1':'a'},{'Col1':'b'}]) /usr/local/lib/python3.7/site-packages/sqlite_utils/db.py in upsert_all(self, records, pk, foreign_keys, column_order, not_null, defaults, batch_size, hash_id, alter, extracts) 1157 alter=alter, 1158 extracts=extracts, -> 1159 upsert=True, 1160 ) 1161 /usr/local/lib/python3.7/site-packages/sqlite_utils/db.py in insert_all(self, records, pk, foreign_keys, column_order, not_null, defaults, batch_size, hash_id, alter, ignore, replace, extracts, upsert) 1040 sql = "INSERT OR IGNORE INTO {table} VALUES({pk_placeholders});".format( 1041 table=self.name, -> 1042 pks=", ".join(["[{}]".format(p) for p in pks]), 1043 pk_placeholders=", ".join(["?" for p in pks]), 1044 ) TypeError: 'NoneType' object is not iterable ``` A hacky workaround in use is:
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sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/73/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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403922644 | MDU6SXNzdWU0MDM5MjI2NDQ= | 8 | Problems handling column names containing spaces or - | psychemedia 82988 | closed | 0 | 3 | 2019-01-28T17:23:28Z | 2019-04-14T15:29:33Z | 2019-02-23T21:09:03Z | NONE | Irrrespective of whether using column names containing a space or - character is good practice, SQLite does allow it, but ```python from sqlite_utils import Database dbname = 'test.db' DB = Database(sqlite3.connect(dbname)) import pandas as pd df = pd.DataFrame({'col1':range(3), 'col2':range(3)}) Convert pandas dataframe to appropriate list/dict formatDB['test1'].insert_all( df.to_dict(orient='records') ) Works fine``` However:
throws: ```OperationalError Traceback (most recent call last) <ipython-input-27-070b758f4f92> in <module>() 1 import pandas as pd 2 df = pd.DataFrame({'col 1':range(3), 'col2':range(3)}) ----> 3 DB['test1'].insert_all(df.to_dict(orient='records')) /usr/local/lib/python3.7/site-packages/sqlite_utils/db.py in insert_all(self, records, pk, foreign_keys, upsert, batch_size, column_order) 327 jsonify_if_needed(record.get(key, None)) for key in all_columns 328 ) --> 329 result = self.db.conn.execute(sql, values) 330 self.db.conn.commit() 331 self.last_id = result.lastrowid OperationalError: near "1": syntax error ``` and:
results in: ```OperationalError Traceback (most recent call last) <ipython-input-28-654523549d20> in <module>() 1 import pandas as pd 2 df = pd.DataFrame({'col-1':range(3), 'col2':range(3)}) ----> 3 DB['test1'].insert_all(df.to_dict(orient='records')) /usr/local/lib/python3.7/site-packages/sqlite_utils/db.py in insert_all(self, records, pk, foreign_keys, upsert, batch_size, column_order) 327 jsonify_if_needed(record.get(key, None)) for key in all_columns 328 ) --> 329 result = self.db.conn.execute(sql, values) 330 self.db.conn.commit() 331 self.last_id = result.lastrowid OperationalError: near "-": syntax error ``` |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/8/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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411066700 | MDU6SXNzdWU0MTEwNjY3MDA= | 10 | Error in upsert if column named 'order' | psychemedia 82988 | closed | 0 | 1 | 2019-02-16T12:05:18Z | 2019-02-24T16:55:38Z | 2019-02-24T16:55:37Z | NONE | The following works fine: ``` connX = sqlite3.connect('DELME.db', timeout=10) dfX=pd.DataFrame({'col1':range(3),'col2':range(3)}) DBX = Database(connX) DBX['test'].upsert_all(dfX.to_dict(orient='records')) ``` But if a column is named dfX=pd.DataFrame({'order':range(3),'col2':range(3)}) DBX = Database(connX) DBX['test'].upsert_all(dfX.to_dict(orient='records')) ``` it throws an error: ```OperationalError Traceback (most recent call last) <ipython-input-130-7dba33cd806c> in <module> 3 dfX=pd.DataFrame({'order':range(3),'col2':range(3)}) 4 DBX = Database(connX) ----> 5 DBX['test'].upsert_all(dfX.to_dict(orient='records')) /usr/local/lib/python3.7/site-packages/sqlite_utils/db.py in upsert_all(self, records, pk, foreign_keys, column_order) 347 foreign_keys=foreign_keys, 348 upsert=True, --> 349 column_order=column_order, 350 ) 351 /usr/local/lib/python3.7/site-packages/sqlite_utils/db.py in insert_all(self, records, pk, foreign_keys, upsert, batch_size, column_order) 327 jsonify_if_needed(record.get(key, None)) for key in all_columns 328 ) --> 329 result = self.db.conn.execute(sql, values) 330 self.db.conn.commit() 331 self.last_id = result.lastrowid OperationalError: near "order": syntax error ``` |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/10/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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