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id | node_id | number | title ▼ | user | state | locked | assignee | milestone | comments | created_at | updated_at | closed_at | author_association | pull_request | body | repo | type | active_lock_reason | performed_via_github_app | reactions | draft | state_reason |
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593751293 | MDU6SXNzdWU1OTM3NTEyOTM= | 97 | Adding a "recreate" flag to the `Database` constructor | betatim 1448859 | closed | 0 | 4 | 2020-04-04T05:41:10Z | 2020-04-15T14:29:31Z | 2020-04-13T03:52:29Z | NONE | I have a script that imports data into a sqlite DB. When I re-run that script I'd like to remove the existing sqlite DB, instead of adding to it. The pragmatic answer is to add the check and file deletion to my script. However I thought it would be easy and useful for others to add a Does anyone have an idea/suggestion where to start investigating? |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/97/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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449818897 | MDU6SXNzdWU0NDk4MTg4OTc= | 24 | Additional Column Constraints? | IgnoredAmbience 98555 | closed | 0 | 6 | 2019-05-29T13:47:03Z | 2019-06-13T06:47:17Z | 2019-06-13T06:30:26Z | NONE | I'm looking to import data from XML with a pre-defined schema that maps fairly closely to a relational database. In particular, it has explicit annotations for when fields are required, optional, or when a default value should be inferred. Would there be value in adding the ability to define |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/24/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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927766296 | MDU6SXNzdWU5Mjc3NjYyOTY= | 291 | Adopt flake8 | simonw 9599 | closed | 0 | 2 | 2021-06-23T01:19:37Z | 2021-06-24T17:50:27Z | 2021-06-24T17:50:27Z | OWNER | sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/291/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1125297737 | I_kwDOCGYnMM5DEq5J | 402 | Advanced class-based `conversions=` mechanism | simonw 9599 | open | 0 | 14 | 2022-02-06T19:47:41Z | 2022-02-16T10:18:55Z | OWNER | The
New proposed mechanism: ```python from sqlite_utils.utils import LongitudeLatitude db["places"].insert(
{
"name": "London",
"point": (-0.118092, 51.509865)
},
conversions={"point": LongitudeLatitude},
)
This would involve a change to the Best of all... this resolves the Originally posted by @simonw in https://github.com/simonw/sqlite-utils/issues/399#issuecomment-1030739566 |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/402/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1740150327 | I_kwDOCGYnMM5nuJY3 | 557 | Aliased ROWID option for tables created from alter=True commands | chapmanjacobd 7908073 | closed | 0 | 2 | 2023-06-04T05:29:28Z | 2023-06-14T06:09:21Z | 2023-06-05T19:26:26Z | CONTRIBUTOR |
ROWID should never be used with foreign keys but the simple act of aliasing rowid to id (which is what happens when one does It would be convenient if there were more options to use a string column (eg. filepath) as the PK, and be able to use it during upserts, but when creating a foreign key, to create an integer column which aliases rowid I made an attempt to switch to integer primary keys here but it is not going well... In my usecase the path column is a business key. Yes, it should be as simple as including the https://github.com/chapmanjacobd/library/actions/runs/5173602136/jobs/9319024777 |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/557/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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449848803 | MDU6SXNzdWU0NDk4NDg4MDM= | 25 | Allow .insert(..., foreign_keys=()) to auto-detect table and primary key | simonw 9599 | closed | 0 | 4 | 2019-05-29T14:39:22Z | 2019-06-13T05:32:32Z | 2019-06-13T05:32:32Z | OWNER | The |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/25/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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729818242 | MDExOlB1bGxSZXF1ZXN0NTEwMjM1OTA5 | 189 | Allow iterables other than Lists in m2m records | adamwolf 35681 | closed | 0 | 3 | 2020-10-26T18:47:44Z | 2020-10-27T16:28:37Z | 2020-10-27T16:24:21Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/189 | I was playing around with sqlite-utils, creating a Roam Research dogsheep-style importer for Datasette, and ran into a slight snag. I wanted to use a generator to add an order column in an importer. It looked something like: ``` def order_generator(iterable, attr=None): if attr is None: attr = "order" order: int = 0
``` When I used this with (I get that it might not really make sense to put the order column on the second table. I changed my import schema a bit, and no longer have a real example, but maybe this change still makes sense.) The automated tests still pass, but I did not add any new ones. Let me know what you think! I'm really loving Datasette and its ecosystem; thanks for everything! |
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1227571375 | I_kwDOCGYnMM5JK0Cv | 431 | Allow making m2m relation of a table to itself | rafguns 738408 | open | 0 | 3 | 2022-05-06T08:30:43Z | 2022-06-23T14:12:51Z | NONE | I am building a database, in which one of the tables has a many-to-many relationship to itself. As far as I can see, this is not (yet) possible using Example: suppose I have a table of people, and I want to store the information that John and Mary have two children, Michael and Suzy. It would be neat if I could do something like this: ```python from sqlite_utils import Database db = Database(memory=True) db["people"].insert({"name": "John"}, pk="name").m2m( "people", [{"name": "Michael"}, {"name": "Suzy"}], m2m_table="parent_child", pk="name" ) db["people"].insert({"name": "Mary"}, pk="name").m2m( "people", [{"name": "Michael"}, {"name": "Suzy"}], m2m_table="parent_child", pk="name" ) ``` But if I do that, the many-to-many table This could be solved by adding one or two keyword_arguments to |
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1077102934 | I_kwDOCGYnMM5AM0lW | 353 | Allow passing a file of code to "sqlite-utils convert" | fgregg 536941 | closed | 0 | 8 | 2021-12-10T18:06:14Z | 2021-12-11T01:38:29Z | 2021-12-11T01:09:39Z | CONTRIBUTOR | sqlite-utils is so nice, but the ergonomics of the multiline code in kind of tough. It's really hard (maybe impossible) to make the newlines play well with Makefiles. it would be great to write your code fragment in a separate file and direct it into the sqlite-utils either like
or
Thanks, as ever, for these great tools! |
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1430563092 | PR_kwDOCGYnMM5B6_6K | 508 | Allow surrogates in parameters | chapmanjacobd 7908073 | closed | 0 | 2 | 2022-10-31T22:11:49Z | 2022-11-17T15:11:16Z | 2022-10-31T22:55:36Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/508 | closes #507 https://dwheeler.com/essays/fixing-unix-linux-filenames.html :books: Documentation preview :books:: https://sqlite-utils--508.org.readthedocs.build/en/508/ |
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1077322009 | I_kwDOCGYnMM5ANqEZ | 355 | Allow users to pass a full convert() function definition | simonw 9599 | closed | 0 | 4 | 2021-12-10T23:59:58Z | 2021-12-11T00:51:15Z | 2021-12-11T00:49:31Z | OWNER |
|
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1718550688 | PR_kwDOCGYnMM5Q9VH0 | 546 | Analyze tables options: --common-limit, --no-most, --no-least | simonw 9599 | closed | 0 | 2 | 2023-05-21T15:54:39Z | 2023-05-21T16:19:30Z | 2023-05-21T16:19:30Z | OWNER | simonw/sqlite-utils/pulls/546 | Refs #544
|
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817989436 | MDU6SXNzdWU4MTc5ODk0MzY= | 242 | Async support | eyeseast 25778 | open | 0 | 13 | 2021-02-27T18:29:38Z | 2021-10-28T14:37:56Z | CONTRIBUTOR | Following our conversation last week, want to note this here before I forget. I've had a couple situations where I'd like to do a bunch of updates in an async event loop, but I run into SQLite's issues with concurrent writes. This feels like something sqlite-utils could help with. PeeWee ORM has a SQLite write queue that might be a good model. It's using threads or gevent, but I think that approach would translate well enough to asyncio. Happy to help with this, too. |
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1718595700 | I_kwDOCGYnMM5mb7B0 | 550 | AttributeError: 'EntryPoints' object has no attribute 'get' for flake8 on Python 3.7 | simonw 9599 | closed | 0 | 3 | 2023-05-21T18:24:39Z | 2023-05-21T18:42:25Z | 2023-05-21T18:41:58Z | OWNER | https://github.com/simonw/sqlite-utils/actions/runs/5039064797/jobs/9036965488
|
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/550/reactions", "total_count": 1, "+1": 1, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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706167456 | MDU6SXNzdWU3MDYxNjc0NTY= | 168 | Automate (as much as possible) updates published to Homebrew | simonw 9599 | closed | 0 | 2 | 2020-09-22T08:08:37Z | 2020-11-09T07:43:30Z | 2020-11-09T07:43:30Z | OWNER | I'd like to get new |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/168/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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925305186 | MDU6SXNzdWU5MjUzMDUxODY= | 282 | Automatic type detection for CSV data | simonw 9599 | closed | 0 | 4 | 2021-06-19T03:33:21Z | 2021-06-19T04:42:03Z | 2021-06-19T04:38:00Z | OWNER | I've touched on this before in #179 - but now that I've added Teaching It's a little inconsistent, but I'm going to have
To opt-in for
I'll have short options for these too: |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/282/reactions", "total_count": 1, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 1, "rocket": 0, "eyes": 0 } |
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1816997390 | I_kwDOCGYnMM5sTS4O | 576 | Backfill the release notes prior to 0.4 | simonw 9599 | closed | 0 | 2 | 2023-07-23T05:41:42Z | 2023-07-23T05:49:51Z | 2023-07-23T05:48:21Z | OWNER | Currently the changelog starts at 0.4: https://sqlite-utils.datasette.io/en/3.34/changelog.html#id115 I want the other releases - according to https://pypi.org/project/sqlite-utils/#history there are three missing: |
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1107557831 | I_kwDOCGYnMM5CA_3H | 386 | Better "contributing" documentation | simonw 9599 | closed | 0 | 0 | 2022-01-19T02:11:48Z | 2022-01-19T02:15:21Z | 2022-01-19T02:15:21Z | OWNER | This page jumps straight into running the tests: https://sqlite-utils.datasette.io/en/latest/contributing.html It should add a little more about expected collaboration styles - opening an issue before filing a pull request - and probably link to https://simonwillison.net/2022/Jan/12/how-i-build-a-feature/ |
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1118585417 | I_kwDOCGYnMM5CrEJJ | 393 | Better documentation for insert-replace | simonw 9599 | closed | 0 | 1 | 2022-01-30T15:40:23Z | 2022-02-03T22:13:24Z | 2022-02-03T22:13:24Z | OWNER | Currently: https://sqlite-utils.datasette.io/en/stable/python-api.html#insert-replacing-data
Should describe the exception you get first, then how to use replace to avoid it. |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/393/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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783778672 | MDU6SXNzdWU3ODM3Nzg2NzI= | 220 | Better error message for *_fts methods against views | mhalle 649467 | closed | 0 | 3 | 2021-01-11T23:24:00Z | 2021-02-22T20:44:51Z | 2021-02-14T22:34:26Z | NONE | enable_fts and its related methods only work on tables, not views. Could those methods and possibly others move up to the Queryable superclass? |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/220/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1094981339 | I_kwDOCGYnMM5BRBbb | 363 | Better error message if `--convert` code fails to return a dict | simonw 9599 | closed | 0 | 4 | 2022-01-06T05:26:28Z | 2022-02-03T22:52:30Z | 2022-02-03T22:51:30Z | OWNER | Here's the traceback if your Traceback (most recent call last): File "/Users/simon/.local/share/virtualenvs/sqlite-utils-C4Ilevlm/bin/sqlite-utils", line 33, in <module> sys.exit(load_entry_point('sqlite-utils', 'console_scripts', 'sqlite-utils')()) File "/Users/simon/.local/share/virtualenvs/sqlite-utils-C4Ilevlm/lib/python3.8/site-packages/click/core.py", line 1137, in call return self.main(args, kwargs) File "/Users/simon/.local/share/virtualenvs/sqlite-utils-C4Ilevlm/lib/python3.8/site-packages/click/core.py", line 1062, in main rv = self.invoke(ctx) File "/Users/simon/.local/share/virtualenvs/sqlite-utils-C4Ilevlm/lib/python3.8/site-packages/click/core.py", line 1668, in invoke return _process_result(sub_ctx.command.invoke(sub_ctx)) File "/Users/simon/.local/share/virtualenvs/sqlite-utils-C4Ilevlm/lib/python3.8/site-packages/click/core.py", line 1404, in invoke return ctx.invoke(self.callback, ctx.params) File "/Users/simon/.local/share/virtualenvs/sqlite-utils-C4Ilevlm/lib/python3.8/site-packages/click/core.py", line 763, in invoke return __callback(args, **kwargs) File "/Users/simon/Dropbox/Development/sqlite-utils/sqlite_utils/cli.py", line 949, in insert insert_upsert_implementation( File "/Users/simon/Dropbox/Development/sqlite-utils/sqlite_utils/cli.py", line 834, in insert_upsert_implementation db[table].insert_all( File "/Users/simon/Dropbox/Development/sqlite-utils/sqlite_utils/db.py", line 2602, in insert_all first_record = next(records) File "/Users/simon/Dropbox/Development/sqlite-utils/sqlite_utils/db.py", line 3044, in fix_square_braces for record in records: File "/Users/simon/Dropbox/Development/sqlite-utils/sqlite_utils/cli.py", line 831, in <genexpr> docs = (decode_base64_values(doc) for doc in docs) File "/Users/simon/Dropbox/Development/sqlite-utils/sqlite_utils/utils.py", line 86, in decode_base64_values to_fix = [ File "/Users/simon/Dropbox/Development/sqlite-utils/sqlite_utils/utils.py", line 89, in <listcomp> if isinstance(doc[k], dict) TypeError: string indices must be integers ``` It would be nicer if that returned a more useful error message. Originally posted by @simonw in https://github.com/simonw/sqlite-utils/issues/361#issuecomment-1006295276 |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/363/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1200866134 | I_kwDOCGYnMM5Hk8NW | 424 | Better error message if you try to create a table with no columns | simonw 9599 | closed | 0 | 1 | 2022-04-12T02:43:20Z | 2022-04-13T22:40:15Z | 2022-04-13T22:40:10Z | OWNER | Seen here: Attempting to create a table with no columns produced this confusing error:
|
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/424/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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711649325 | MDU6SXNzdWU3MTE2NDkzMjU= | 182 | Better handling of encodings other than utf-8 for "sqlite-utils insert" | kaihendry 765871 | closed | 0 | 5 | 2020-09-30T05:43:48Z | 2020-10-16T17:20:41Z | 2020-10-16T17:18:52Z | NONE | Makefile: ``` data.db: curl -O http://maps.natalian.org/data.txt go run csv-write.go > data.csv sqlite-utils insert data.db travels data.csv --csv clean: rm data* ``` csv-write.go Error message is:
Little bit surprised if Go is spewing out bad Unicode, but I'm not sure how to grok |
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688659182 | MDU6SXNzdWU2ODg2NTkxODI= | 145 | Bug when first record contains fewer columns than subsequent records | simonwiles 96218 | closed | 0 | 2 | 2020-08-30T05:44:44Z | 2020-09-08T23:21:23Z | 2020-09-08T23:21:23Z | CONTRIBUTOR |
I suspect that this bug is masked somewhat by the fact that while:
it is common that it is increased at compile time. Debian-based systems, for example, seem to ship with a version of sqlite compiled with A test for this issue might look like this:
The best solution, I think, is simply to process all the records when determining columns, column types, and the batch size. In my tests this doesn't seem to be particularly costly at all, and cuts out a lot of complications (including obviating my implementation of #139 at #142). I'll raise a PR for your consideration. |
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1306548397 | I_kwDOCGYnMM5N4Fit | 454 | CLI command for duplicating tables | simonw 9599 | closed | 0 | 1 | 2022-07-15T21:31:27Z | 2022-07-15T21:48:23Z | 2022-07-15T21:45:51Z | OWNER | CLI equivalent of: - #449 |
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1205687423 | I_kwDOCGYnMM5H3VR_ | 426 | CLI docs should link to Python docs and vice versa | simonw 9599 | closed | 0 | simonw 9599 | 1 | 2022-04-15T16:05:15Z | 2023-07-22T22:13:22Z | 2023-07-22T22:13:22Z | OWNER | For every command/API method there should be a link to the equivalent in the other form factor. Maybe also link to the API and CLI reference pages too. |
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1239034903 | I_kwDOCGYnMM5J2iwX | 433 | CLI eats my cursor | chapmanjacobd 7908073 | closed | 0 | 10 | 2022-05-17T18:52:52Z | 2023-11-04T00:46:30Z | 2023-11-04T00:46:30Z | CONTRIBUTOR | I'm not sure why this happens but I can still type commands after it runs but the text cursor is invisible |
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1855894222 | I_kwDOCGYnMM5unrLO | 585 | CLI equivalents to `transform(add_foreign_keys=)` | simonw 9599 | closed | 0 | 7 | 2023-08-18T01:07:15Z | 2023-08-18T01:51:16Z | 2023-08-18T01:51:15Z | OWNER | The new options added in: - #577 Deserve consideration in the CLI as well. |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/585/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1098544628 | I_kwDOCGYnMM5BenX0 | 379 | CLI options for running ANALYZE | simonw 9599 | closed | 0 | 3.21 7558727 | 0 | 2022-01-11T01:09:16Z | 2022-01-11T01:38:01Z | 2022-01-11T01:36:48Z | OWNER |
Originally posted by @simonw in https://github.com/simonw/sqlite-utils/issues/366#issuecomment-1009508865
In #378 I also added |
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665700495 | MDU6SXNzdWU2NjU3MDA0OTU= | 122 | CLI utility for inserting binary files into SQLite | simonw 9599 | closed | 0 | 10 | 2020-07-26T03:27:39Z | 2020-07-27T07:10:41Z | 2020-07-27T07:09:03Z | OWNER | SQLite BLOB columns can store entire binary files. The challenge is inserting them, since they don't neatly fit into JSON objects. It would be great if the Inspired by https://github.com/simonw/datasette-media/issues/14 |
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1271426387 | I_kwDOCGYnMM5LyG1T | 444 | CSV `extras_key=` and `ignore_extras=` equivalents for CLI tool | simonw 9599 | open | 0 | 5 | 2022-06-14T22:22:47Z | 2022-07-07T16:39:18Z | OWNER |
Originally posted by @simonw in https://github.com/simonw/sqlite-utils/issues/440#issuecomment-1155767915 |
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1250629388 | I_kwDOCGYnMM5KixcM | 440 | CSV files with too many values in a row cause errors | frafra 4068 | closed | 0 | 20 | 2022-05-27T10:54:44Z | 2022-06-14T22:23:01Z | 2022-06-14T20:12:46Z | NONE | Original title: csv.DictReader can have None as key In some cases, ```python url="https://artsdatabanken.no/Fab2018/api/export/csv" db = sqlite_utils.Database(":memory") with urlopen(url) as fab:
reader, _ = sqlite_utils.utils.rows_from_file(fab, encoding="utf-16le") Result:
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602569315 | MDU6SXNzdWU2MDI1NjkzMTU= | 102 | Can't store an array or dictionary containing a bytes value | simonw 9599 | closed | 0 | 0 | 2020-04-18T22:49:21Z | 2020-05-01T20:45:45Z | 2020-05-01T20:45:45Z | OWNER | ``` In [1]: import sqlite_utils In [2]: db = sqlite_utils.Database(memory=True) In [3]: db["t"].insert({"id": 1, "data": {"foo": b"bytes"}})TypeError Traceback (most recent call last) <ipython-input-3-a8ab1f72c72c> in <module> ----> 1 db["t"].insert({"id": 1, "data": {"foo": b"bytes"}}) ~/Dropbox/Development/sqlite-utils/sqlite_utils/db.py in insert(self, record, pk, foreign_keys, column_order, not_null, defaults, hash_id, alter, ignore, replace, extracts, conversions, columns) 950 extracts=extracts, 951 conversions=conversions, --> 952 columns=columns, 953 ) 954 ~/Dropbox/Development/sqlite-utils/sqlite_utils/db.py in insert_all(self, records, pk, foreign_keys, column_order, not_null, defaults, batch_size, hash_id, alter, ignore, replace, extracts, conversions, columns, upsert) 1052 for key in all_columns: 1053 value = jsonify_if_needed( -> 1054 record.get(key, None if key != hash_id else _hash(record)) 1055 ) 1056 if key in extracts: ~/Dropbox/Development/sqlite-utils/sqlite_utils/db.py in jsonify_if_needed(value) 1318 def jsonify_if_needed(value): 1319 if isinstance(value, (dict, list, tuple)): -> 1320 return json.dumps(value) 1321 elif isinstance(value, (datetime.time, datetime.date, datetime.datetime)): 1322 return value.isoformat() /usr/local/Cellar/python/3.7.4_1/Frameworks/Python.framework/Versions/3.7/lib/python3.7/json/init.py in dumps(obj, skipkeys, ensure_ascii, check_circular, allow_nan, cls, indent, separators, default, sort_keys, **kw) 229 cls is None and indent is None and separators is None and 230 default is None and not sort_keys and not kw): --> 231 return _default_encoder.encode(obj) 232 if cls is None: 233 cls = JSONEncoder /usr/local/Cellar/python/3.7.4_1/Frameworks/Python.framework/Versions/3.7/lib/python3.7/json/encoder.py in encode(self, o) 197 # exceptions aren't as detailed. The list call should be roughly 198 # equivalent to the PySequence_Fast that ''.join() would do. --> 199 chunks = self.iterencode(o, _one_shot=True) 200 if not isinstance(chunks, (list, tuple)): 201 chunks = list(chunks) /usr/local/Cellar/python/3.7.4_1/Frameworks/Python.framework/Versions/3.7/lib/python3.7/json/encoder.py in iterencode(self, o, _one_shot) 255 self.key_separator, self.item_separator, self.sort_keys, 256 self.skipkeys, _one_shot) --> 257 return _iterencode(o, 0) 258 259 def _make_iterencode(markers, _default, _encoder, _indent, _floatstr, /usr/local/Cellar/python/3.7.4_1/Frameworks/Python.framework/Versions/3.7/lib/python3.7/json/encoder.py in default(self, o) 177 178 """ --> 179 raise TypeError(f'Object of type {o.class.name} ' 180 f'is not JSON serializable') 181 TypeError: Object of type bytes is not JSON serializable ``` |
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573740712 | MDU6SXNzdWU1NzM3NDA3MTI= | 90 | Cannot .enable_fts() for columns with spaces in their names | simonw 9599 | closed | 0 | 0 | 2020-03-02T06:06:03Z | 2020-03-02T06:10:49Z | 2020-03-02T06:10:49Z | OWNER | ```
import sqlite_utils
db = sqlite_utils.Database(memory=True) OperationalError Traceback (most recent call last) <ipython-input-8-ce4b87dd1c7a> in <module> ----> 1 db['test'].enable_fts(["space in name"]) /usr/local/lib/python3.7/site-packages/sqlite_utils/db.py in enable_fts(self, columns, fts_version, create_triggers) 755 ) 756 self.db.conn.executescript(sql) --> 757 self.populate_fts(columns) 758 759 if create_triggers: /usr/local/lib/python3.7/site-packages/sqlite_utils/db.py in populate_fts(self, columns) 787 table=self.name, columns=", ".join(columns) 788 ) --> 789 self.db.conn.executescript(sql) 790 return self 791 OperationalError: near "in": syntax error ``` |
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1434911255 | I_kwDOCGYnMM5VhwIX | 510 | Cannot enable FTS5 despite it being available | ar-jan 1176293 | closed | 0 | 3 | 2022-11-03T16:03:49Z | 2022-11-18T18:37:52Z | 2022-11-17T10:36:28Z | NONE | When I do FTS5 is however available and Python/SQLite versions do not seem to be the issue. I can manually create the FTS5 virtual table, and then Datasette also works with it from this same Python environment.
Any ideas what's happening and how to fix? |
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1976986318 | I_kwDOCGYnMM511mrO | 599 | Cannot find spatialite on arm64 linux | MikeCoats 37802088 | closed | 0 | 1 | 2023-11-03T22:05:51Z | 2023-11-04T01:06:31Z | 2023-11-04T00:33:28Z | CONTRIBUTOR | Initially, I found an issue in
I did some digging and realised the issue originates in this project. Even with the ``` $ apt list --installed | grep spatial […] libsqlite3-mod-spatialite/stable,now 5.0.1-3 arm64 [installed] $ ls -l /usr/lib//spatial* lrwxrwxrwx 1 root root 23 Dec 1 2022 /usr/lib/aarch64-linux-gnu/mod_spatialite.so -> mod_spatialite.so.7.1.0 lrwxrwxrwx 1 root root 23 Dec 1 2022 /usr/lib/aarch64-linux-gnu/mod_spatialite.so.7 -> mod_spatialite.so.7.1.0 -rw-r--r-- 1 root root 7348584 Dec 1 2022 /usr/lib/aarch64-linux-gnu/mod_spatialite.so.7.1.0 ```
I tracked the issue down to the |
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919314806 | MDU6SXNzdWU5MTkzMTQ4MDY= | 270 | Cannot set type JSON | frafra 4068 | closed | 0 | 4 | 2021-06-11T23:53:22Z | 2021-06-16T17:34:49Z | 2021-06-16T15:47:06Z | NONE | It would be great if the column type could be set to JSON. That would not be different from handling a regular string. It would be something like |
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1907281675 | I_kwDOCGYnMM5xrs8L | 595 | Cascading DELETE not working with Table.delete(pk) | cycle-data 123451970 | closed | 0 | 1 | 2023-09-21T15:46:41Z | 2023-09-25T09:38:57Z | 2023-09-25T09:38:13Z | NONE | Hi ! I noticed that when I am trying to use the delete method of the Table object, the record get properly deleted from the table, but the cascading delete triggers on foreign keys do not activate.
I tried querying the database directly via DB Browser and the triggers work without any issue. Looked up the source code and behind the scene this method is just querying the database normally so I'm not exactly sure where this behavior comes from. Thank you in advance for your time ! |
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683805434 | MDU6SXNzdWU2ODM4MDU0MzQ= | 135 | Code for finding SpatiaLite in the usual locations | simonw 9599 | closed | 0 | 3 | 2020-08-21T20:15:34Z | 2022-02-05T00:04:26Z | 2020-08-21T20:30:13Z | OWNER | I built this for
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586486367 | MDU6SXNzdWU1ODY0ODYzNjc= | 95 | Columns with only null values are no longer created in the database | simonw 9599 | closed | 0 | 0 | 2020-03-23T20:07:42Z | 2020-03-23T20:31:15Z | 2020-03-23T20:31:15Z | OWNER | Bug introduced in #94, and released in |
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1257724585 | I_kwDOCGYnMM5K91qp | 441 | Combining `rows_where()` and `search()` to limit which rows are searched | betatim 1448859 | closed | 0 | 4 | 2022-06-02T06:01:55Z | 2022-06-14T21:57:57Z | 2022-06-14T21:54:38Z | NONE | What is the right way to limit a full text search query to some rows of a table? For example, I have a table that contains the following columns: I tried to combine My two questions:
1. is adding a Right now I am thinking I will make my own version of Bonus question: is this generally useful/something to add to sqlite-utils or too niche? |
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1067771698 | I_kwDOCGYnMM4_pOcy | 348 | Command for creating an empty database | simonw 9599 | closed | 0 | 3.21 7558727 | 6 | 2021-11-30T23:24:27Z | 2022-01-13T07:06:59Z | 2022-01-09T20:33:20Z | OWNER | I sometimes find the need to create an empty SQLite database file - for example if I want to enable WAL on it before using it with another script. I currently do that like this:
It would be nice if |
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1353441389 | I_kwDOCGYnMM5Qq-Bt | 477 | Conda Forge | thewchan 49702524 | closed | 0 | 2 | 2022-08-28T19:03:08Z | 2022-09-07T03:46:55Z | 2022-09-07T03:46:55Z | NONE | Hello! I have successfully put this package on to Conda Forge, and I have extending the invitation for the owner/maintainers of this package to be maintainers on Conda Forge as well. Let me know if you are interested! Thanks. https://github.com/conda-forge/sqlite-utils-feedstock |
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958516743 | MDU6SXNzdWU5NTg1MTY3NDM= | 306 | Configure sphinx.ext.extlinks for issues | simonw 9599 | closed | 0 | 2 | 2021-08-02T21:19:19Z | 2021-08-02T21:39:34Z | 2021-08-02T21:29:22Z | OWNER | As seen in Datasette: https://github.com/simonw/datasette/issues/1227 |
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1326349129 | I_kwDOCGYnMM5PDntJ | 461 | Consider including animated SVG console demos | simonw 9599 | open | 0 | 1 | 2022-08-02T20:10:04Z | 2022-08-02T20:12:14Z | OWNER | I recorded this one using https://github.com/nbedos/termtosvg - with
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1171599874 | I_kwDOCGYnMM5F1TIC | 415 | Convert with `--multi` and `--dry-run` flag does not work | dotcs 3976183 | closed | 0 | 2 | 2022-03-16T21:59:46Z | 2022-03-21T04:18:24Z | 2022-03-21T04:18:24Z | NONE | It's not possible to combine Let's first create a simple database from JSON string
and then try to convert the "foo" column with a static value "bar" (see docs Converting a column into multiple columns)
But without the
|
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830803173 | MDExOlB1bGxSZXF1ZXN0NTkyMjg5MzI0 | 245 | Correct some typos | dbready 1076745 | closed | 0 | 1 | 2021-03-13T04:26:56Z | 2021-05-19T02:58:04Z | 2021-05-19T02:58:04Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/245 | Noticed a typo in the docs and followed that up with a spellcheck. Had to bite my tongue at some of the British spellings. |
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1149729902 | PR_kwDOCGYnMM4zbaJy | 410 | Correct spelling mistakes (found with codespell) | EdwardBetts 3818 | closed | 0 | 1 | 2022-02-24T20:44:18Z | 2022-03-06T08:48:29Z | 2022-03-01T21:05:29Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/410 | sqlite-utils 140912432 | pull | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/410/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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562911863 | MDU6SXNzdWU1NjI5MTE4NjM= | 85 | Create index doesn't work for columns containing spaces | simonw 9599 | closed | 0 | 1 | 2020-02-11T00:34:46Z | 2020-02-11T05:13:20Z | 2020-02-11T05:13:20Z | OWNER | sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/85/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1128466114 | I_kwDOCGYnMM5DQwbC | 406 | Creating tables with custom datatypes | psychemedia 82988 | open | 0 | 5 | 2022-02-09T12:16:31Z | 2022-09-15T18:13:50Z | NONE | Via https://stackoverflow.com/a/18622264/454773 I note the ability to register custom handlers for novel datatypes that can map into and out of things like sqlite From a quick look and a quick play, I didn't spot a way to do this in For example: ```python Via https://stackoverflow.com/a/18622264/454773import sqlite3 import numpy as np import io def adapt_array(arr): """ http://stackoverflow.com/a/31312102/190597 (SoulNibbler) """ out = io.BytesIO() np.save(out, arr) out.seek(0) return sqlite3.Binary(out.read()) def convert_array(text): out = io.BytesIO(text) out.seek(0) return np.load(out) Converts np.array to TEXT when insertingsqlite3.register_adapter(np.ndarray, adapt_array) Converts TEXT to np.array when selectingsqlite3.register_converter("array", convert_array) ``` ```python from sqlite_utils import Database db = Database('test.db') Reset the database connection to used the parsed datatypesqlite_utils doesn't seem to support eg:Database('test.db', detect_types=sqlite3.PARSE_DECLTYPES)db.conn = sqlite3.connect(db_name, detect_types=sqlite3.PARSE_DECLTYPES) Create a table the old fashioned waybut using the new custom data typevector_table_create = """ CREATE TABLE dummy (title TEXT, vector array ); """ cur = db.conn.cursor() cur.execute(vector_table_create) sqlite_utils doesn't appear to support custom types (yet?!)The following errors on the "array" datatype""" db["dummy"].create({ "title": str, "vector": "array", }) """ ``` We can then add / retrieve records from the database where the datatype of the ```python import numpy as np db["dummy"].insert({'title':"test1", 'vector':np.array([1,2,3])}) for row in db.query("SELECT * FROM dummy"): print(row['title'], row['vector'], type(row['vector'])) """ test1 [1 2 3] <class 'numpy.ndarray'> """ ``` It would be handy to be able to do this idiomatically in |
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1326087800 | PR_kwDOCGYnMM48hI-_ | 460 | Cross-link CLI to Python docs | simonw 9599 | closed | 0 | 4 | 2022-08-02T16:18:28Z | 2022-08-18T21:58:10Z | 2022-08-18T21:58:07Z | OWNER | simonw/sqlite-utils/pulls/460 | Work in progress, partly to test the ReadTheDocs preview link action. Refs: - #426 :books: Documentation preview :books:: https://readthedocs-preview--460.org.readthedocs.build/en/460/ |
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1550536442 | I_kwDOCGYnMM5ca076 | 521 | Custom JSON encoder | janrito 31504 | open | 0 | 0 | 2023-01-20T09:19:40Z | 2023-01-20T09:19:40Z | NONE | It would be nice if we could specify a custom encoder (and decoder) for types that will need extra deserialisation – e.g., sets, enums or sparse matrices – or even project-specific types |
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1046271107 | PR_kwDOCGYnMM4uK5z2 | 337 | Default values for `--attach` and `--param` options | urbas 771193 | closed | 0 | 1 | 2021-11-05T21:57:53Z | 2021-11-05T22:33:03Z | 2021-11-05T22:33:02Z | NONE | simonw/sqlite-utils/pulls/337 | It seems that This change makes the code forward-compatible with See this build failure for more info: https://hydra.nixos.org/build/156926608 |
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1223177069 | PR_kwDOCGYnMM43LrKB | 429 | Depend on click-default-group-wheel | simonw 9599 | closed | 0 | 2 | 2022-05-02T18:03:10Z | 2022-05-02T18:52:42Z | 2022-05-02T18:05:00Z | OWNER | simonw/sqlite-utils/pulls/429 | Trying to get this to work with Pyodide. Refs: https://github.com/simonw/click-default-group-wheel/issues/3 |
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413740684 | MDU6SXNzdWU0MTM3NDA2ODQ= | 11 | Detect numpy types when creating tables | simonw 9599 | closed | 0 | 2 | 2019-02-23T21:09:35Z | 2019-02-24T04:02:20Z | 2019-02-24T04:02:20Z | OWNER | Inspired by #8 |
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1326391841 | PR_kwDOCGYnMM48iLGF | 462 | Discord badge | simonw 9599 | closed | 0 | 2 | 2022-08-02T20:56:04Z | 2022-08-02T21:15:57Z | 2022-08-02T21:15:52Z | OWNER | simonw/sqlite-utils/pulls/462 | Also testing fix for: - https://github.com/readthedocs/readthedocs-preview/issues/10 :books: Documentation preview :books:: https://sqlite-utils--462.org.readthedocs.build/en/462/ |
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1166587040 | I_kwDOCGYnMM5FiLSg | 413 | Display autodoc type information more legibly | simonw 9599 | closed | 0 | 5 | 2022-03-11T15:58:20Z | 2022-03-11T18:07:10Z | 2022-03-11T18:07:10Z | OWNER | https://sqlite-utils.datasette.io/en/3.25/reference.html#sqlite_utils.db.Table.insert looks like this at the moment: |
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1126692066 | I_kwDOCGYnMM5DJ_Ti | 403 | Document how to add a primary key to a rowid table using `sqlite-utils transform --pk` | fgregg 536941 | closed | 0 | 4 | 2022-02-08T01:39:40Z | 2022-02-09T04:22:43Z | 2022-02-08T19:33:59Z | CONTRIBUTOR | Original title: Add option for adding a new, serial, primary key sometimes we have tables that don't have primary keys, but ought to have them. we can use rowid for that, but it would often be nicer to have an explicit primary key. using the current value of rowid would be fine. |
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1718612569 | I_kwDOCGYnMM5mb_JZ | 552 | Document how to setup shell auto-completion | simonw 9599 | closed | 0 | 1 | 2023-05-21T19:20:41Z | 2023-05-21T21:05:16Z | 2023-05-21T21:03:40Z | OWNER | https://click.palletsprojects.com/en/8.1.x/shell-completion/ This works for
This will probably work for
Need to add this to the installation docs here: https://sqlite-utils.datasette.io/en/stable/installation.html - along with the pattern for adding that to |
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1386593843 | I_kwDOCGYnMM5Spb4z | 494 | Document how to use Just | simonw 9599 | closed | 0 | 2 | 2022-09-26T19:25:12Z | 2022-09-26T19:32:36Z | 2022-09-26T19:26:39Z | OWNER | I'm using https://github.com/simonw/sqlite-utils/blob/afbd2b2cba45cccb305c3d4638d18db4dd3d4bbd/Justfile#L1-L24 |
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1224112817 | I_kwDOCGYnMM5I9nqx | 430 | Document how to use `PRAGMA temp_store` to avoid errors when running VACUUM against huge databases | rayvoelker 9308268 | open | 0 | 2 | 2022-05-03T13:33:58Z | 2022-06-14T23:26:37Z | NONE | I'm trying to figure out a way to get the Here's the bit that's causing the error, and the resulting error output: ```python combine these columns into 1 table "bib_properties" :best_titlebib_level_codemat_typematerial_codebest_authordb["circ_trans"].extract( ["best_title", "bib_level_code", "mat_type", "material_code", "best_author"], table="bib_properties", fk_column="bib_properties_id" ) db["circ_trans"].extract( ["call_number"], table="call_number", fk_column="call_number_id", rename={"call_number": "value"} ) ``` ```pythonOperationalError Traceback (most recent call last) Input In [17], in <cell line: 7>() 1 # combine these columns into 1 table "bib_properties" : 2 # best_title 3 # bib_level_code 4 # mat_type 5 # material_code 6 # best_author ----> 7 db["circ_trans"].extract( 8 ["best_title", "bib_level_code", "mat_type", "material_code", "best_author"], 9 table="bib_properties", 10 fk_column="bib_properties_id" 11 ) 13 db["circ_trans"].extract( 14 ["call_number"], 15 table="call_number", 16 fk_column="call_number_id", 17 rename={"call_number": "value"} 18 ) File ~/jupyter/venv/lib/python3.10/site-packages/sqlite_utils/db.py:1764, in Table.extract(self, columns, table, fk_column, rename) 1761 column_order.append(c.name) 1763 # Drop the unnecessary columns and rename lookup column -> 1764 self.transform( 1765 drop=set(columns), 1766 rename={magic_lookup_column: fk_column}, 1767 column_order=column_order, 1768 ) 1770 # And add the foreign key constraint 1771 self.add_foreign_key(fk_column, table, "id") File ~/jupyter/venv/lib/python3.10/site-packages/sqlite_utils/db.py:1526, in Table.transform(self, types, rename, drop, pk, not_null, defaults, drop_foreign_keys, column_order) 1524 with self.db.conn: 1525 for sql in sqls: -> 1526 self.db.execute(sql) 1527 # Run the foreign_key_check before we commit 1528 if pragma_foreign_keys_was_on: File ~/jupyter/venv/lib/python3.10/site-packages/sqlite_utils/db.py:465, in Database.execute(self, sql, parameters) 463 return self.conn.execute(sql, parameters) 464 else: --> 465 return self.conn.execute(sql) OperationalError: database or disk is full ``` This database is about 17G in total size, so I'm assuming the error is coming from the vacuum ... where i'm assuming it's maybe trying to do the temp storage in a location that doesn't have sufficient room. The disk space is more than ample on the host in question (1.8T is free in the directory where the sqlite db resides) The I'm trying to think if there's a way to set the ```python SET the temp file store to be a file ...print(db.execute('PRAGMA temp_store').fetchall()) print(db.execute('PRAGMA temp_store=FILE').fetchall()) print(db.execute('PRAGMA temp_store').fetchall()) the users home directory ...print(db.execute("PRAGMA temp_store_directory='/home/plchuser/'").fetchall()) print(db.execute("PRAGMA sqlite3_temp_directory='/home/plchuser/'").fetchall()) print(db.execute("PRAGMA temp_store_directory").fetchall())
print(db.execute("PRAGMA sqlite3_temp_directory").fetchall())
Here's the docs on the Temporary File Storage Locations https://www.sqlite.org/tempfiles.html |
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1178546862 | I_kwDOCGYnMM5GPzKu | 420 | Document how to use a `--convert` function that runs initialization code first | strada 770231 | closed | 0 | 12 | 2022-03-23T19:07:36Z | 2022-08-28T11:34:37Z | 2022-03-25T20:07:33Z | NONE | When I have an insert command with transform like this:
I noticed as the number of rows increases the operation becomes quite slow, likely due to the creation of the |
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1786243905 | I_kwDOCGYnMM5qd-tB | 564 | Document that running `db.transform()` tidies up the schema indentation | simonw 9599 | closed | 0 | 0 | 2023-07-03T13:59:28Z | 2023-07-22T22:15:34Z | 2023-07-22T22:15:34Z | OWNER |
```pycon <Table log (id, name2, age, weight, foo)> >>> db["log"].add_column("bar", str) <Table log (id, name2, age, weight, foo, bar)> >>> db["log"].add_column("baz", str) <Table log (id, name2, age, weight, foo, bar, baz)> >>> print(db["log"].schema) CREATE TABLE "log" ( [id] INTEGER PRIMARY KEY, [name2] TEXT, [age] INTEGER, [weight] FLOAT , [foo] TEXT, [bar] TEXT, [baz] TEXT) >>> db["log"].transform() <Table log (id, name2, age, weight, foo, bar, baz)> >>> print(db["log"].schema) CREATE TABLE "log" ( [id] INTEGER PRIMARY KEY, [name2] TEXT, [age] INTEGER, [weight] FLOAT, [foo] TEXT, [bar] TEXT, [baz] TEXT ) ``` _Originally posted by @simonw in https://github.com/simonw/llm/issues/65#issuecomment-1618347727_ |
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644122661 | MDU6SXNzdWU2NDQxMjI2NjE= | 116 | Documentation for table.pks introspection property | simonw 9599 | closed | 0 | 2 | 2020-06-23T20:27:24Z | 2020-06-23T21:21:33Z | 2020-06-23T21:03:14Z | OWNER | sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/116/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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611326701 | MDU6SXNzdWU2MTEzMjY3MDE= | 108 | Documentation unit tests for CLI commands | simonw 9599 | closed | 0 | 2 | 2020-05-03T03:58:42Z | 2020-05-03T04:13:57Z | 2020-05-03T04:13:57Z | OWNER | Have a test that ensures all CLI commands are documented. |
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1816877910 | I_kwDOCGYnMM5sS1tW | 572 | Don't test Python 3.7 against textual | simonw 9599 | closed | 0 | 2 | 2023-07-22T19:57:03Z | 2023-07-22T22:16:50Z | 2023-07-22T22:16:50Z | OWNER | Spotted this in the GitHub Actions logs: |
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1487757143 | I_kwDOCGYnMM5YrV9X | 517 | Drop support for Python 3.6 | simonw 9599 | closed | 0 | 1 | 2022-12-10T01:23:31Z | 2022-12-10T01:36:36Z | 2022-12-10T01:36:36Z | OWNER | CI has started failing for Python 3.6: https://github.com/simonw/sqlite-utils/actions/runs/3576322798 It's fixable by swiching away from But https://endoflife.date/python says that 3.6 end of life was almost 6 years ago, and end of security support nearly 1 year ago. So I'm OK dropping support entirely - Python 3.6 users will still be able to install version 3.30, just not any releases that come next. |
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1578793661 | PR_kwDOCGYnMM5Jqn1u | 528 | Enable `Table.convert()` on falsey values | mcarpenter 167893 | closed | 0 | 1 | 2023-02-10T00:04:09Z | 2023-05-08T21:08:23Z | 2023-05-08T21:08:23Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/528 | Fixes #527 :books: Documentation preview :books:: https://sqlite-utils--528.org.readthedocs.build/en/528/ |
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922955697 | MDU6SXNzdWU5MjI5NTU2OTc= | 275 | Enable code coverage | simonw 9599 | closed | 0 | 1 | 2021-06-16T18:33:49Z | 2021-06-17T00:12:12Z | 2021-06-17T00:12:12Z | OWNER | https://app.codecov.io/gh/simonw/sqlite-utils Same mechanism as Datasette. Need to copy across the token from that page and add an equivalent of this workflow: https://github.com/simonw/datasette/blob/main/.github/workflows/test-coverage.yml |
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577302229 | MDU6SXNzdWU1NzczMDIyMjk= | 91 | Enable ordering FTS results by rank | gfrmin 416374 | closed | 0 | 3.0 6079500 | 1 | 2020-03-07T08:43:51Z | 2020-11-06T23:53:26Z | 2020-11-06T23:53:25Z | NONE | According to https://www.sqlite.org/fts5.html (not sure about FTS4) results can be sorted by relevance. At the moment results are returned by default by |
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411066700 | MDU6SXNzdWU0MTEwNjY3MDA= | 10 | Error in upsert if column named 'order' | psychemedia 82988 | closed | 0 | 1 | 2019-02-16T12:05:18Z | 2019-02-24T16:55:38Z | 2019-02-24T16:55:37Z | NONE | The following works fine: ``` connX = sqlite3.connect('DELME.db', timeout=10) dfX=pd.DataFrame({'col1':range(3),'col2':range(3)}) DBX = Database(connX) DBX['test'].upsert_all(dfX.to_dict(orient='records')) ``` But if a column is named dfX=pd.DataFrame({'order':range(3),'col2':range(3)}) DBX = Database(connX) DBX['test'].upsert_all(dfX.to_dict(orient='records')) ``` it throws an error: ```OperationalError Traceback (most recent call last) <ipython-input-130-7dba33cd806c> in <module> 3 dfX=pd.DataFrame({'order':range(3),'col2':range(3)}) 4 DBX = Database(connX) ----> 5 DBX['test'].upsert_all(dfX.to_dict(orient='records')) /usr/local/lib/python3.7/site-packages/sqlite_utils/db.py in upsert_all(self, records, pk, foreign_keys, column_order) 347 foreign_keys=foreign_keys, 348 upsert=True, --> 349 column_order=column_order, 350 ) 351 /usr/local/lib/python3.7/site-packages/sqlite_utils/db.py in insert_all(self, records, pk, foreign_keys, upsert, batch_size, column_order) 327 jsonify_if_needed(record.get(key, None)) for key in all_columns 328 ) --> 329 result = self.db.conn.execute(sql, values) 330 self.db.conn.commit() 331 self.last_id = result.lastrowid OperationalError: near "order": syntax error ``` |
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807174161 | MDU6SXNzdWU4MDcxNzQxNjE= | 227 | Error reading csv files with large column data | camallen 295329 | closed | 0 | 4 | 2021-02-12T11:51:47Z | 2021-02-16T11:48:03Z | 2021-02-14T21:17:19Z | NONE | Feel free to close this issue - I mostly added it for reference for future folks that run into this :) I have a CSV file with one column that has very long strings. When i try to import this file via the Traceback (most recent call last):
File "/usr/local/bin/sqlite-utils", line 10, in <module>
sys.exit(cli())
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 829, in call
return self.main(args, kwargs)
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 782, in main
rv = self.invoke(ctx)
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 1259, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 1066, in invoke
return ctx.invoke(self.callback, ctx.params)
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 610, in invoke
return callback(args, kwargs)
File "/usr/local/lib/python3.7/site-packages/sqlite_utils/cli.py", line 774, in insert
default=default,
File "/usr/local/lib/python3.7/site-packages/sqlite_utils/cli.py", line 705, in insert_upsert_implementation
docs, pk=pk, batch_size=batch_size, alter=alter, extra_kwargs
File "/usr/local/lib/python3.7/site-packages/sqlite_utils/db.py", line 1852, in insert_all
first_record = next(records)
File "/usr/local/lib/python3.7/site-packages/sqlite_utils/cli.py", line 703, in <genexpr>
docs = (decode_base64_values(doc) for doc in docs)
File "/usr/local/lib/python3.7/site-packages/sqlite_utils/cli.py", line 681, in <genexpr>
docs = (dict(zip(headers, row)) for row in reader)
_csv.Error: field larger than field limit (131072)
sqlite-utils --versionsqlite-utils, version 3.4.1 datasette --versiondatasette, version 0.54 ``` It appears this is a known issue reading in csv files in python and doesn't look to be modifiable through system / env vars (i may be very wrong on this). Noting that using sqlite3 Finally, I'm loving https://datasette.io/ thank you very much for an amazing tool and data ecosytem 🙇♀️ |
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487847945 | MDExOlB1bGxSZXF1ZXN0MzEzMDA3NDgz | 56 | Escape the table name in populate_fts and search. | amjith 49260 | closed | 0 | 2 | 2019-09-01T06:29:05Z | 2019-09-02T17:23:21Z | 2019-09-02T17:23:21Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/56 | The table names weren't escaped using double quotes in the populate_fts method. Reproducible case: ``` <Table http://example.com (id, age, name)> >>> db["http://example.com"].enable_fts(["name"]) Traceback (most recent call last): File "", line 1, in <module> db["http://example.com"].enable_fts(["name"]) File "/home/amjith/.virtualenvs/itsysearch/lib/python3.7/site-packages/sqlite_utils/db.py", l ine 705, in enable_fts self.populate_fts(columns) File "/home/amjith/.virtualenvs/itsysearch/lib/python3.7/site-packages/sqlite_utils/db.py", l ine 715, in populate_fts self.db.conn.executescript(sql) sqlite3.OperationalError: unrecognized token: ":" >>> ``` |
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831751367 | MDU6SXNzdWU4MzE3NTEzNjc= | 246 | Escaping FTS search strings | DeNeutoy 16001974 | closed | 0 | 4 | 2021-03-15T12:15:09Z | 2021-08-18T18:57:13Z | 2021-08-18T18:43:12Z | CONTRIBUTOR | Thanks for the excellent library, it's very nice to use! I've been building some in memory search functionality for a data annotation tool i'm making, and I got tripped up a little bit with escaping the full text search queries. First I tried using http://search-24ways.herokuapp.com/24ways-f8f455f/articles?_search=acces%2A I got around this by aggressively escaping quotes inside the query string like this: ```python quoted = q.replace('"', '""') quoted = f'"{quoted}"' print(quoted) results = db["data"].search(quoted, columns=["id"]) return [x["id"] for x in results] ``` This works in the sense it doesn't crash, but it also removes access to the search query syntax. Given the well specified definition, it might be possible for sqlite-utils to provide a |
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351845423 | MDU6SXNzdWUzNTE4NDU0MjM= | 3 | Experiment with contentless FTS tables | simonw 9599 | closed | 0 | 1 | 2018-08-18T19:31:01Z | 2019-07-22T20:58:55Z | 2019-07-22T20:58:55Z | OWNER | Could greatly reduce size of resulting database for large datasets: http://cocoamine.net/blog/2015/09/07/contentless-fts4-for-large-immutable-documents/ |
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465815372 | MDU6SXNzdWU0NjU4MTUzNzI= | 37 | Experiment with type hints | simonw 9599 | closed | 0 | 6 | 2019-07-09T14:30:34Z | 2021-08-18T21:48:57Z | 2021-08-18T21:48:57Z | OWNER | Since it's designed to be used in Jupyter or for rapid prototyping in an IDE (and it's still pretty small) https://veekaybee.github.io/2019/07/08/python-type-hints/ is good. It suggests the mypy docs for getting started: https://mypy.readthedocs.io/en/latest/existing_code.html plus this tutorial: https://pymbook.readthedocs.io/en/latest/typehinting.html |
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546078359 | MDExOlB1bGxSZXF1ZXN0MzU5ODIyNzcz | 75 | Explicitly include tests and docs in sdist | jayvdb 15092 | closed | 0 | 1 | 2020-01-07T04:53:20Z | 2020-01-31T00:21:27Z | 2020-01-31T00:21:27Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/75 | Also exclude 'tests' from runtime installation. |
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1784794489 | I_kwDOCGYnMM5qYc15 | 562 | Explore the intersection between sqlite-utils and dataclasses | simonw 9599 | open | 0 | 1 | 2023-07-02T19:23:08Z | 2023-07-02T19:26:39Z | OWNER |
Originally posted by @simonw in https://github.com/simonw/llm/issues/65#issuecomment-1616742529 |
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1363766973 | I_kwDOCGYnMM5RSW69 | 484 | Expose convert recipes to `sqlite-utils --functions` | simonw 9599 | open | 0 | 11 | 2022-09-06T20:15:08Z | 2022-09-07T19:09:52Z | OWNER |
It would be useful if the |
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1058196641 | I_kwDOCGYnMM4_Esyh | 342 | Extra options to `lookup()` which get passed to `insert()` | simonw 9599 | closed | 0 | 7 | 2021-11-19T06:53:03Z | 2021-11-19T07:26:54Z | 2021-11-19T07:26:54Z | OWNER | For https://github.com/simonw/git-history/issues/12 I found myself wanting to pass extra options to |
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810618495 | MDU6SXNzdWU4MTA2MTg0OTU= | 235 | Extract columns cannot create foreign key relation: sqlite3.OperationalError: table sqlite_master may not be modified | kristomi 6913891 | closed | 0 | 18 | 2021-02-17T23:33:23Z | 2023-06-26T01:47:01Z | 2023-06-25T23:25:53Z | NONE | Thanks for what seems like a truly great suite of libraries. I wanted to try out Datasette, but never got more than half way through your YouTube video with the SF tree dataset. Whenever I try to extract a column, I get a I have tried googling the problem, but all I've found is that this might be a problem with the sqlite3 database running in defensive mode, but I definitely can't know for sure. Does the problem seem familiar to you? |
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816601354 | MDExOlB1bGxSZXF1ZXN0NTgwMjM1NDI3 | 241 | Extract expand - work in progress | simonw 9599 | open | 0 | 0 | 2021-02-25T16:36:38Z | 2021-02-25T16:36:38Z | OWNER | simonw/sqlite-utils/pulls/241 | Refs #239. Still needs documentation and CLI implementation. |
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1000275035 | PR_kwDOCGYnMM4r7n-9 | 327 | Extract expand: Support JSON Arrays | phaer 101753 | closed | 0 | 0 | 2021-09-19T10:34:30Z | 2022-12-29T09:05:36Z | 2022-12-29T09:05:36Z | NONE | simonw/sqlite-utils/pulls/327 | Hi, I needed to extract data in JSON Arrays to normalize data imports. I've quickly hacked the following together based on #241 which refers to #239 where you, @simonw, wrote:
They way this works in my work is that many-to-many relationships are created for anything that maps to an dictionary in a list, and many-to-one relations for everything else (assumed to be scalar values). Not sure what the best approach here would be? Are many-to-one relationships are at all useful here? What do you think about this approach? I could try to add it to the cli interface and documentation if wanted. Thanks for this awesome piece of software in any case! :sun_with_face: |
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832687563 | MDExOlB1bGxSZXF1ZXN0NTkzODA1ODA0 | 247 | FTS quote functionality from datasette | DeNeutoy 16001974 | closed | 0 | 2 | 2021-03-16T11:17:34Z | 2021-08-18T18:43:12Z | 2021-08-18T18:43:12Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/247 | Addresses #246 - this is a bit of a kludge because it doesn't actually validate the FTS string, just makes sure that it will not crash when executed, but I figured that building a query parser is a bit out of the scope of sqlite-utils and if you actually want to use the query language, you probably need to parse that yourself. |
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695319258 | MDU6SXNzdWU2OTUzMTkyNTg= | 149 | FTS table with 7 rows has _fts_docsize table with 9,141 rows | simonw 9599 | closed | 0 | 10 | 2020-09-07T18:06:16Z | 2020-09-07T21:16:34Z | 2020-09-07T21:16:34Z | OWNER | I'm seeing a weird issue with some of the SQLite databases that I am using with the FTS5 module. I have a database with a The FTS table also has 7 rows: https://github-to-sqlite.dogsheep.net/github/licenses_fts Somehow the accompanying And I have a hunch that it might be a problem with the triggers. These are the triggers that are updating that FTS table: https://github-to-sqlite.dogsheep.net/github?sql=select+*+from+sqlite_master+where+type+%3D+%27trigger%27+and+tbl_name+%3D+%27licenses%27 | type | name | tbl_name | rootpage | sql |
| --- | --- | --- | --- | --- |
| trigger | licenses_ai | licenses | 0 | |
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695359607 | MDU6SXNzdWU2OTUzNTk2MDc= | 150 | Feature for tracing SQL queries | simonw 9599 | closed | 0 | 0 | 2020-09-07T19:43:08Z | 2020-09-07T21:57:01Z | 2020-09-07T21:57:01Z | OWNER | Debugging An optional "tracing" mechanism for seeing what SQL is being executed would be useful. |
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534507142 | MDU6SXNzdWU1MzQ1MDcxNDI= | 69 | Feature request: enable extensions loading | aborruso 30607 | closed | 0 | 3 | 2019-12-08T08:06:25Z | 2022-02-05T00:04:25Z | 2020-10-16T18:42:49Z | NONE | Hi, it would be great to add a parameter that enables the load of a sqlite extension you need. Something like "-ext modspatialite". In this way your great tool would be even more comfortable and powerful. Thank you very much |
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1479914599 | I_kwDOCGYnMM5YNbRn | 516 | Feature request: output number of ignored/replaced rows for insert command | simonw 9599 | open | 0 | 4 | 2022-12-06T18:59:21Z | 2022-12-06T19:08:14Z | OWNER | https://hachyderm.io/@briandorsey/109468185742876820
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1560651350 | I_kwDOCGYnMM5dBaZW | 523 | Feature request: trim all leading and trailing white space for all columns for all tables in a database | fgregg 536941 | open | 0 | 1 | 2023-01-28T02:40:10Z | 2023-01-28T02:41:14Z | CONTRIBUTOR | It's pretty common that i need to trim leading or trailing white space from lots of columns in a database a part of an initial ETL. I use the following recipe a lot, and it would be great to include this functionality into sqlite-utils
then something like:
|
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675839512 | MDU6SXNzdWU2NzU4Mzk1MTI= | 132 | Features for enabling and disabling WAL mode | simonw 9599 | closed | 0 | 5 | 2020-08-10T03:25:44Z | 2020-08-10T18:59:35Z | 2020-08-10T18:59:35Z | OWNER | I finally figured out how to enable WAL - turns out it's a property of the database file itself: https://github.com/simonw/til/blob/master/sqlite/enabling-wal-mode.md |
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1041778507 | I_kwDOCGYnMM4-GEdL | 334 | Filter by datetime objects using rows_where() | viseshrp 11642379 | closed | 0 | 0 | 2021-11-02T00:44:08Z | 2021-11-13T19:23:21Z | 2021-11-13T19:23:21Z | NONE | Firstly, thanks for this nice utility.
It would be nice to have an example in the docs on how to filter by date range using I could probably just use |
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1733198948 | I_kwDOCGYnMM5nToRk | 555 | Filter table by a large bunch of ids | redraw 10843208 | open | 0 | 1 | 2023-05-31T00:29:51Z | 2023-06-14T22:01:57Z | NONE | Hi! this might be a question related to both SQLite & sqlite-utils, and you might be more experienced with them. I have a large bunch of ids, and I'm wondering which is the best way to query them in terms of performance, and simplicity if possible. The naive approach would be something like Another approach might be creating a temp table, or in-memory db table, insert all ids in that table and then join with the target one. I failed to attach an in-memory db both using sqlite-utils, and plain sql's execute(), so my closest approach is something like,
That kinda worked, I couldn't find an option in sqlite-utils's |
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697203800 | MDExOlB1bGxSZXF1ZXN0NDgzMTc1NTA5 | 158 | Fix accidental mega long line in docs | tomviner 167319 | closed | 0 | 1 | 2020-09-09T22:31:23Z | 2020-09-16T06:21:43Z | 2020-09-16T06:21:43Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/158 | sqlite-utils 140912432 | pull | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/158/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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473733752 | MDExOlB1bGxSZXF1ZXN0MzAxODI0MDk3 | 51 | Fix for too many SQL variables, closes #50 | simonw 9599 | closed | 0 | 1 | 2019-07-28T11:30:30Z | 2019-07-28T11:59:32Z | 2019-07-28T11:59:32Z | OWNER | simonw/sqlite-utils/pulls/51 | sqlite-utils 140912432 | pull | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/51/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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857280617 | MDExOlB1bGxSZXF1ZXN0NjE0NzI3MDM2 | 254 | Fix incorrect create-table cli description | robjwells 1935268 | closed | 0 | 1 | 2021-04-13T20:03:15Z | 2021-05-19T04:43:46Z | 2021-05-19T02:57:26Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/254 | The description for |
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652816158 | MDExOlB1bGxSZXF1ZXN0NDQ1ODMzOTA4 | 120 | Fix query command's support for DML | tsibley 79913 | closed | 0 | 1 | 2020-07-08T01:36:34Z | 2020-07-08T05:14:04Z | 2020-07-08T05:14:04Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/120 | See commit messages for details. I ran into this while investigating another feature/issue. |
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1576990618 | PR_kwDOCGYnMM5JkkED | 526 | Fix repeated calls to `Table.convert()` | mcarpenter 167893 | closed | 0 | 0 | 2023-02-09T00:14:49Z | 2023-05-08T21:56:05Z | 2023-05-08T21:53:58Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/526 | Fixes #525. All tests pass. There's perhaps a better way to name lambdas? There could be a collision if a caller passes a function with name like SQLite documentation is a little, ah, lite on function name specs. If there is a character that can be used in place of underscore in a SQLite function name that is not permitted in a Python function identifier then that could be a good way to prevent accidental collisions. (I tried dash, colon, dot, no joy). Otherwise, there is little chance of this happening and if it should happen the risk is mitigated by now throwing an exception in the case of a (name, arity) collision without :books: Documentation preview :books:: https://sqlite-utils--526.org.readthedocs.build/en/526/ |
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1422954582 | I_kwDOCGYnMM5U0JBW | 502 | Fix tests for Python 3.11 | simonw 9599 | closed | 0 | 1 | 2022-10-25T19:20:31Z | 2022-10-25T19:23:47Z | 2022-10-25T19:23:47Z | OWNER | The way errors are represented has changed: https://github.com/simonw/sqlite-utils/actions/runs/3323588047/jobs/5494127154 ``` ____ testquery_invalid_function ______ db_path = '/tmp/pytest-of-runner/pytest-0/test_query_invalid_function0/test.db'
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970320615 | MDU6SXNzdWU5NzAzMjA2MTU= | 316 | Fix visible backticks on reference page | simonw 9599 | closed | 0 | 1 | 2021-08-13T11:37:46Z | 2021-08-14T05:12:23Z | 2021-08-14T05:10:48Z | OWNER | https://sqlite-utils.datasette.io/en/latest/reference.html Search for backtick to reveal various minor markup bugs. |
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543738004 | MDExOlB1bGxSZXF1ZXN0MzU3OTkyNTg4 | 72 | Fixed implementation of upsert | simonw 9599 | closed | 0 | 0 | 2019-12-30T05:08:05Z | 2019-12-30T05:29:24Z | 2019-12-30T05:29:24Z | OWNER | simonw/sqlite-utils/pulls/72 | Refs #66 |
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