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id | node_id | number | title | user ▲ | state | locked | assignee | milestone | comments | created_at | updated_at | closed_at | author_association | pull_request | body | repo | type | active_lock_reason | performed_via_github_app | reactions | draft | state_reason |
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1907281675 | I_kwDOCGYnMM5xrs8L | 595 | Cascading DELETE not working with Table.delete(pk) | cycle-data 123451970 | closed | 0 | 1 | 2023-09-21T15:46:41Z | 2023-09-25T09:38:57Z | 2023-09-25T09:38:13Z | NONE | Hi ! I noticed that when I am trying to use the delete method of the Table object, the record get properly deleted from the table, but the cascading delete triggers on foreign keys do not activate.
I tried querying the database directly via DB Browser and the triggers work without any issue. Looked up the source code and behind the scene this method is just querying the database normally so I'm not exactly sure where this behavior comes from. Thank you in advance for your time ! |
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1366423176 | I_kwDOCGYnMM5RcfaI | 485 | Progressbar not shown when inserting/upserting jsonlines file | MischaU8 99098079 | closed | 0 | 1 | 2022-09-08T14:13:18Z | 2022-09-15T20:39:52Z | 2022-09-15T20:37:52Z | CONTRIBUTOR | When inserting or upserting a jsonlines file, no progressbar is shown. Expected behavior is that, just like with .csv/.tsv files, also for a jsonlines file (--nl), unless --silent is provided, a progressbar is shown.
Currently |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/485/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1366512990 | PR_kwDOCGYnMM4-nBs9 | 486 | progressbar for inserts/upserts of all fileformats, closes #485 | MischaU8 99098079 | closed | 0 | 7 | 2022-09-08T14:58:02Z | 2022-09-15T20:40:03Z | 2022-09-15T20:37:51Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/486 | :books: Documentation preview :books:: https://sqlite-utils--486.org.readthedocs.build/en/486/ |
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1620254998 | I_kwDOCGYnMM5gkyEW | 532 | Show more information when JSON can't be imported with sqlite-utils insert | voltagex 83080728 | closed | 0 | 2 | 2023-03-12T06:41:44Z | 2023-05-08T20:32:16Z | 2023-05-08T20:32:02Z | NONE | I am currently trying to import the JSON export of my data from Discord, specifically
Please show more information as to why this is invalid, if possible. I am using version 3.30 with Python 3.10 on Windows 11. |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/532/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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976399638 | MDU6SXNzdWU5NzYzOTk2Mzg= | 319 | [Enhancement] Please allow 'insert-files' to insert content as text. | pjamargh 66709385 | closed | 0 | 10 | 2021-08-22T15:10:46Z | 2021-08-24T23:33:45Z | 2021-08-24T23:33:44Z | NONE | 'insert-files' creates BLOB columns for file contents. Transforming the column to TEXT still keep the content as binary. Even though I'm sure there is a transform that can be applied decoding the text it would be great to have a argument to make 'insert-files' to do it as text (with optional text encoding). The use case is a bunch of htmls (single file) on a directory structure that inserted with this command could be served in Datasette allowing full text search. |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/319/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1026794056 | I_kwDOCGYnMM49M6JI | 331 | Mypy error: found module but no type hints or library stubs | andreaslongo 53032010 | closed | 0 | 2 | 2021-10-14T20:29:50Z | 2021-11-14T23:21:08Z | 2021-11-14T23:21:08Z | NONE |
While using sqlite-utils as a library, when I use mypy for static type checking, it throws an error:
When I add a
I would like to suggest adding a See also the mypy docs on creating PEP 561 compatible packages: https://mypy.readthedocs.io/en/stable/installed_packages.html#creating-pep-561-compatible-packages |
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1353441389 | I_kwDOCGYnMM5Qq-Bt | 477 | Conda Forge | thewchan 49702524 | closed | 0 | 2 | 2022-08-28T19:03:08Z | 2022-09-07T03:46:55Z | 2022-09-07T03:46:55Z | NONE | Hello! I have successfully put this package on to Conda Forge, and I have extending the invitation for the owner/maintainers of this package to be maintainers on Conda Forge as well. Let me know if you are interested! Thanks. https://github.com/conda-forge/sqlite-utils-feedstock |
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792297010 | MDExOlB1bGxSZXF1ZXN0NTYwMjA0MzA2 | 224 | Add fts offset docs. | polyrand 37962604 | closed | 0 | 2 | 2021-01-22T20:50:58Z | 2021-02-14T19:31:06Z | 2021-02-14T19:31:06Z | NONE | simonw/sqlite-utils/pulls/224 | The limit can be passed as a string to the query builder to have an offset. I have tested it using the shorthand |
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1976986318 | I_kwDOCGYnMM511mrO | 599 | Cannot find spatialite on arm64 linux | MikeCoats 37802088 | closed | 0 | 1 | 2023-11-03T22:05:51Z | 2023-11-04T01:06:31Z | 2023-11-04T00:33:28Z | CONTRIBUTOR | Initially, I found an issue in
I did some digging and realised the issue originates in this project. Even with the ``` $ apt list --installed | grep spatial […] libsqlite3-mod-spatialite/stable,now 5.0.1-3 arm64 [installed] $ ls -l /usr/lib//spatial* lrwxrwxrwx 1 root root 23 Dec 1 2022 /usr/lib/aarch64-linux-gnu/mod_spatialite.so -> mod_spatialite.so.7.1.0 lrwxrwxrwx 1 root root 23 Dec 1 2022 /usr/lib/aarch64-linux-gnu/mod_spatialite.so.7 -> mod_spatialite.so.7.1.0 -rw-r--r-- 1 root root 7348584 Dec 1 2022 /usr/lib/aarch64-linux-gnu/mod_spatialite.so.7.1.0 ```
I tracked the issue down to the |
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1977004379 | PR_kwDOCGYnMM5elFZf | 600 | Add spatialite arm64 linux path | MikeCoats 37802088 | closed | 0 | 5 | 2023-11-03T22:23:26Z | 2023-11-04T00:34:33Z | 2023-11-04T00:31:49Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/600 | According to both Debian and Ubuntu, the correct “target triple” for arm64 is I can confirm that on both of my Debian arm64 SBCs,
This is a set of before and after snippets of pytest’s output for this PR. Before
After
Issue: #599 :books: Documentation preview :books:: https://sqlite-utils--600.org.readthedocs.build/en/600/ |
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1199158210 | I_kwDOCGYnMM5HebPC | 423 | .extract() doesn't set foreign key when extracted columns contain NULL value | jlieth 37447552 | closed | 0 | 1 | 2022-04-10T20:05:30Z | 2022-08-27T14:45:04Z | 2022-08-27T14:45:04Z | NONE | I've run into an issue with I'm working with a database with music listening information. Currently it has one large table A simplified demonstration with just In [2]: db = sqlite_utils.Database(memory=True) In [3]: db["listens"].insert_all([ ...: {"id": 1, "track_title": "foo", "album_title": "bar"}, ...: {"id": 2, "track_title": "baz", "album_title": None} ...: ], pk="id") Out[3]: <Table listens (id, track_title, album_title)> ``` The track in the first row has an album, the second track doesn't. Now I extract album information into a separate column: ```ipython In [4]: db["listens"].extract(columns=["album_title"], table="albums", fk_column="album_id") Out[4]: <Table listens (id, track_title, album_id)> In [5]: list(db["albums"].rows) Out[5]: [{'id': 1, 'album_title': 'bar'}, {'id': 2, 'album_title': None}] In [6]: list(db["listens"].rows) Out[6]: [{'id': 1, 'track_title': 'foo', 'album_id': 1}, {'id': 2, 'track_title': 'baz', 'album_id': None}] ``` This behaves as expected -- the Now I want to extract the track information as well. Album information belongs to the track so I want to extract both columns to a new table. ```ipython In [7]: db["listens"].extract(columns=["track_title", "album_id"], table="tracks", fk_column="track_id") Out[7]: <Table listens (id, track_id)> In [8]: list(db["tracks"].rows) Out[8]: [{'id': 1, 'track_title': 'foo', 'album_id': 1}, {'id': 2, 'track_title': 'baz', 'album_id': None}] In [9]: list(db["listens"].rows) Out[9]: [{'id': 1, 'track_id': 1}, {'id': 2, 'track_id': None}] ``` Extracting to the Changing the order of extracts doesn't help. I poked around in the source a bit and I believe this line (essentially comparing |
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589801352 | MDExOlB1bGxSZXF1ZXN0Mzk1MjU4Njg3 | 96 | Add type conversion for Panda's Timestamp | b0b5h4rp13 32605365 | closed | 0 | 2 | 2020-03-29T14:13:09Z | 2020-03-31T04:40:49Z | 2020-03-31T04:40:48Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/96 | Add type conversion for Panda's Timestamp, if Panda library is present in system (thanks for this project, I was about to do the same thing from scratch) |
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610517472 | MDU6SXNzdWU2MTA1MTc0NzI= | 103 | sqlite3.OperationalError: too many SQL variables in insert_all when using rows with varying numbers of columns | b0b5h4rp13 32605365 | closed | 0 | 8 | 2020-05-01T02:26:14Z | 2020-05-14T00:18:57Z | 2020-05-14T00:18:57Z | CONTRIBUTOR | If using insert_all to put in 1000 rows of data with varying number of columns, it comes up with this message I've reduced
|
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944326512 | MDU6SXNzdWU5NDQzMjY1MTI= | 296 | `table.search(..., quote=True)` parameter and `sqlite-utils search --quote` option | deafmute1 32427188 | closed | 0 | 6 | 2021-07-14T11:26:47Z | 2021-08-18T20:13:12Z | 2021-08-18T20:10:48Z | NONE | Hi,
Recently got this error:
My solution was to just strip these out of the query using this line
Perhaps this could be included into the |
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1145882578 | I_kwDOCGYnMM5ETMfS | 408 | `deterministic=True` fails on versions of SQLite prior to 3.8.3 | learning4life 24938923 | closed | 0 | 6 | 2022-02-21T14:36:43Z | 2022-03-13T16:54:09Z | 2022-03-02T00:38:11Z | NONE | Hi, love your work. I am unable to lookup indexes in a database using sqlite-utils:
or
Software sqlite-utils, version 3.24 sqlite3 --version: 3.36.0 Output: Traceback (most recent call last): File "/opt/app-root/bin/sqlite-utils", line 8, in <module> sys.exit(cli()) File "/opt/app-root/lib64/python3.8/site-packages/click/core.py", line 1128, in call return self.main(args, kwargs) File "/opt/app-root/lib64/python3.8/site-packages/click/core.py", line 1053, in main rv = self.invoke(ctx) File "/opt/app-root/lib64/python3.8/site-packages/click/core.py", line 1659, in invoke return _process_result(sub_ctx.command.invoke(sub_ctx)) File "/opt/app-root/lib64/python3.8/site-packages/click/core.py", line 1395, in invoke return ctx.invoke(self.callback, ctx.params) File "/opt/app-root/lib64/python3.8/site-packages/click/core.py", line 754, in invoke return __callback(args, kwargs) File "/opt/app-root/lib64/python3.8/site-packages/click/decorators.py", line 26, in new_func return f(get_current_context(), *args, kwargs) File "/opt/app-root/lib64/python3.8/site-packages/sqlite_utils/cli.py", line 2123, in indexes ctx.invoke( File "/opt/app-root/lib64/python3.8/site-packages/click/core.py", line 754, in invoke return __callback(args, kwargs) File "/opt/app-root/lib64/python3.8/site-packages/sqlite_utils/cli.py", line 1624, in query db.register_fts4_bm25() File "/opt/app-root/lib64/python3.8/site-packages/sqlite_utils/db.py", line 403, in register_fts4_bm25 self.register_function(rank_bm25, deterministic=True) File "/opt/app-root/lib64/python3.8/site-packages/sqlite_utils/db.py", line 399, in register_function register(fn) File "/opt/app-root/lib64/python3.8/site-packages/sqlite_utils/db.py", line 392, in register self.conn.create_function(name, arity, fn, *kwargs) sqlite3.NotSupportedError: deterministic=True requires SQLite 3.8.3 or higher |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/408/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1180427792 | I_kwDOCGYnMM5GW-YQ | 421 | "Error: near "(": syntax error" when using sqlite-utils indexes CLI | learning4life 24938923 | closed | 0 | 8 | 2022-03-25T07:12:51Z | 2022-04-13T22:41:59Z | 2022-04-13T22:41:59Z | NONE | This bug relates to https://github.com/simonw/sqlite-utils/issues/408#issuecomment-1066139147 New error when using CLI: "sqlite-utils indexes global.db --table"
Dockerfile ``` FROM centos/python-38-centos7 USER root RUN yum update -y RUN yum upgrade -y epelRUN yum -y install epel-release && yum clean all SQLiteRUN yum -y install zlib-devel geos geos-devel proj proj-devel freexl freexl-devel libxml2-devel WORKDIR /build/ COPY sqlite-autoconf-3360000.tar.gz ./ RUN tar -zxf sqlite-autoconf-3360000.tar.gz WORKDIR /build/sqlite-autoconf-3360000 RUN ./configure RUN make RUN make install RUN /opt/app-root/bin/python3.8 -m pip install --upgrade pip RUN pip install sqlite-utils ``` |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/421/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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767685961 | MDU6SXNzdWU3Njc2ODU5NjE= | 210 | Support of RData files | PeterBailey 23739126 | closed | 0 | 1 | 2020-12-15T15:04:14Z | 2021-01-02T00:02:40Z | 2021-01-02T00:02:40Z | NONE | Hi Simon, Would be great if you could ingest RData files! I could do this in a few lines of code but I am too lazy - sorry! Peter |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/210/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1028056713 | I_kwDOCGYnMM49RuaJ | 332 | `sqlite-utils memory --flatten` option to flatten nested JSON | rdtq 22523840 | closed | 0 | 1 | 2021-10-16T14:04:42Z | 2021-11-14T23:05:05Z | 2021-11-14T23:05:05Z | NONE | currently --flatten option works only for |
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1572766460 | I_kwDOCGYnMM5dvoL8 | 524 | Transformation type `--type DATETIME` | 4l1fe 21095447 | closed | 0 | 15 | 2023-02-06T15:18:42Z | 2023-02-15T12:10:54Z | 2023-02-15T12:10:54Z | NONE | Hey. Currently i do transformation with the type Is it possible to alter a column type to |
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963897111 | MDU6SXNzdWU5NjM4OTcxMTE= | 309 | sqlite-utils insert errors should show SQL and parameters, if possible | scaleoutsean 16622642 | closed | 0 | 6 | 2021-08-09T11:24:14Z | 2021-08-09T23:40:29Z | 2021-08-09T22:25:58Z | NONE | I've tried several approaches, but this is the current one:
I googled the error and checked SO answers and advice, all good. I changed my JSON file to not use integers so I no longer get this error. Of course, that makes using the database a bit harder, so I also tried to solve the problem by modifying DB structure (while using integers in JSON). If change all If that is the case, can this error be a bit more specific for easier troubleshooting - maybe tell us which which record caused the problem when that error is thrown? My table has 60+ columns, many of which use 64-bit integers (not all records are large or known in advance), so while I can modify JSON to use strings instead of integers, it decreases usability and finding out which records have values for which SQLite integers aren't sufficient requires some work (I'm thinking about parsing all integers with My environment:
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2001006157 | PR_kwDOCGYnMM5f2OZC | 604 | Add more STRICT table support | tkhattra 16437338 | closed | 0 | 4 | 2023-11-19T19:38:53Z | 2023-12-08T05:17:20Z | 2023-12-08T05:05:27Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/604 | Make :books: Documentation preview :books:: https://sqlite-utils--604.org.readthedocs.build/en/604/ |
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831751367 | MDU6SXNzdWU4MzE3NTEzNjc= | 246 | Escaping FTS search strings | DeNeutoy 16001974 | closed | 0 | 4 | 2021-03-15T12:15:09Z | 2021-08-18T18:57:13Z | 2021-08-18T18:43:12Z | CONTRIBUTOR | Thanks for the excellent library, it's very nice to use! I've been building some in memory search functionality for a data annotation tool i'm making, and I got tripped up a little bit with escaping the full text search queries. First I tried using http://search-24ways.herokuapp.com/24ways-f8f455f/articles?_search=acces%2A I got around this by aggressively escaping quotes inside the query string like this: ```python quoted = q.replace('"', '""') quoted = f'"{quoted}"' print(quoted) results = db["data"].search(quoted, columns=["id"]) return [x["id"] for x in results] ``` This works in the sense it doesn't crash, but it also removes access to the search query syntax. Given the well specified definition, it might be possible for sqlite-utils to provide a |
sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/246/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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832687563 | MDExOlB1bGxSZXF1ZXN0NTkzODA1ODA0 | 247 | FTS quote functionality from datasette | DeNeutoy 16001974 | closed | 0 | 2 | 2021-03-16T11:17:34Z | 2021-08-18T18:43:12Z | 2021-08-18T18:43:12Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/247 | Addresses #246 - this is a bit of a kludge because it doesn't actually validate the FTS string, just makes sure that it will not crash when executed, but I figured that building a query parser is a bit out of the scope of sqlite-utils and if you actually want to use the query language, you probably need to parse that yourself. |
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1801394744 | I_kwDOCGYnMM5rXxo4 | 567 | Plugin system | asg017 15178711 | closed | 0 | 9 | 2023-07-12T17:02:14Z | 2023-07-22T22:59:37Z | 2023-07-22T22:59:36Z | CONTRIBUTOR | I'd like there to be a plugin system for sqlite-utils, similar to the datasette/llm plugins. I'd like to make plugins that would do things like:
A few real-world use-cases of plugins I'd like to see in sqlite-utils:
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1816917522 | PR_kwDOCGYnMM5WJ6Jm | 573 | feat: Implement a prepare_connection plugin hook | asg017 15178711 | closed | 0 | 4 | 2023-07-22T22:48:44Z | 2023-07-22T22:59:09Z | 2023-07-22T22:59:09Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/573 | Just like the Datasette prepare_connection hook, this PR adds a similar hook for the The sole argument is I want to do this so I can release An example plugin: https://gist.github.com/asg017/d7cdf0d56e2be87efda28cebee27fa3c ```bash $ sqlite-utils install https://gist.github.com/asg017/d7cdf0d56e2be87efda28cebee27fa3c/archive/5f5ad549a40860787629c69ca120a08c32519e99.zip $ sqlite-utils memory 'select hello("alex") as response' [{"response": "Hello, alex!"}] ``` Refs: - #574 :books: Documentation preview :books:: https://sqlite-utils--573.org.readthedocs.build/en/573/ |
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1505568103 | PR_kwDOCGYnMM5F609a | 519 | Fixes breaking DEFAULT values | rhoboro 13819005 | closed | 0 | 1 | 2022-12-21T01:27:52Z | 2023-05-08T21:13:37Z | 2023-05-08T21:13:37Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/519 | Fixes #509, Fixes #336 Thanks for the great library!
I fixed a bug that In #509 case, fixed here. ```shell $ sqlite3 test.db << EOF CREATE TABLE mytable ( col1 TEXT DEFAULT 'foo', col2 TEXT DEFAULT (STRFTIME('%Y-%m-%d %H:%M:%f', 'NOW')) ) EOF $ sqlite3 test.db "SELECT sql FROM sqlite_master WHERE name = 'mytable';" CREATE TABLE mytable ( col1 TEXT DEFAULT 'foo', col2 TEXT DEFAULT (STRFTIME('%Y-%m-%d %H:%M:%f', 'NOW')) ) $ sqlite3 test.db "INSERT INTO mytable DEFAULT VALUES; SELECT * FROM mytable;" foo|2022-12-21 01:15:39.669 $ sqlite-utils transform test.db mytable --rename col1 renamedcol1 $ sqlite3 test.db "SELECT sql FROM sqlite_master WHERE name = 'mytable';" CREATE TABLE "mytable" ( [renamedcol1] TEXT DEFAULT 'foo', [col2] TEXT DEFAULT (STRFTIME('%Y-%m-%d %H:%M:%f', 'NOW')) # ← Non-String Value ) $ sqlite3 test.db "INSERT INTO mytable DEFAULT VALUES; SELECT * FROM mytable;" foo|2022-12-21 01:15:39.669 foo|2022-12-21 01:15:56.432 ``` And #336 case also fixed. Special values are described here.
```shell $ echo 'create table bar (baz text, created_at timestamp default CURRENT_TIMESTAMP)' | sqlite3 foo.db $ sqlite3 foo.db SQLite version 3.39.5 2022-10-14 20:58:05 Enter ".help" for usage hints. sqlite> .schema bar CREATE TABLE bar (baz text, created_at timestamp default CURRENT_TIMESTAMP); sqlite> .exit $ sqlite-utils transform foo.db bar --column-order baz $ sqlite3 foo.db SQLite version 3.39.5 2022-10-14 20:58:05 Enter ".help" for usage hints. sqlite> .schema bar CREATE TABLE IF NOT EXISTS "bar" ( [baz] TEXT, [created_at] FLOAT DEFAULT CURRENT_TIMESTAMP ); sqlite> .exit $ sqlite-utils transform foo.db bar --column-order baz $ sqlite3 foo.db SQLite version 3.39.5 2022-10-14 20:58:05 Enter ".help" for usage hints. sqlite> .schema bar CREATE TABLE IF NOT EXISTS "bar" ( [baz] TEXT, [created_at] FLOAT DEFAULT CURRENT_TIMESTAMP # ← Non-String Value ); ``` :books: Documentation preview :books:: https://sqlite-utils--519.org.readthedocs.build/en/519/ |
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2007893839 | I_kwDOCGYnMM53rgdP | 605 | Insert fails with `Error: Python int too large to convert to SQLite INTEGER`; can we use `NUMERIC` here? | Zac-HD 12229877 | closed | 0 | 1 | 2023-11-23T10:19:46Z | 2023-12-08T05:07:54Z | 2023-12-08T05:07:54Z | NONE | I'm currently working on a new feature for Hypothesis, where we can dump a tidy jsonlines table of all the test cases we tried - including arguments, outcomes, timings, coverage, etc. Exploring this seems like a perfect cases for I originally went to report this as a bug... and then found https://github.com/simonw/sqlite-utils/issues/309#issuecomment-895581038 almost exactly matched my repro 😅 https://github.com/simonw/sqlite-utils/issues/110#issuecomment-626391063 suggests that using After a bit more hacking, "manually cast large integers to float" seems like a decent solution for my particular case, but having written it up I thought I might as well post this issue anyway - I hope it's useful feedback, and won't mind at all if you close as wontfix if it's not. |
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1041778507 | I_kwDOCGYnMM4-GEdL | 334 | Filter by datetime objects using rows_where() | viseshrp 11642379 | closed | 0 | 0 | 2021-11-02T00:44:08Z | 2021-11-13T19:23:21Z | 2021-11-13T19:23:21Z | NONE | Firstly, thanks for this nice utility.
It would be nice to have an example in the docs on how to filter by date range using I could probably just use |
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549287310 | MDU6SXNzdWU1NDkyODczMTA= | 76 | order_by mechanism | metab0t 10501166 | closed | 0 | 4 | 2020-01-14T02:06:03Z | 2020-04-16T06:23:29Z | 2020-04-16T03:13:06Z | NONE | In some cases, I want to iterate rows in a table with |
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559197745 | MDU6SXNzdWU1NTkxOTc3NDU= | 82 | Tutorial command no longer works | petey284 10350886 | closed | 0 | 3 | 2020-02-03T16:36:11Z | 2020-02-27T04:16:43Z | 2020-02-27T04:16:30Z | NONE | Issue with command on tutorial on Simon's site. The following command no longer works, and breaks with the previous too many variables error: #50 ``` cmd
Output:
My thought is that maybe the dataset grew over the last few years and so didn't run into this issue before. No error when I reduce the count of entries to 83. Once the number of entries hits 84 the command fails. // This passes
// But this fails
A potential fix might be to chunk the incoming data? I can work on a PR if pointed in right direction. |
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564579430 | MDU6SXNzdWU1NjQ1Nzk0MzA= | 86 | Problem with square bracket in CSV column name | foscoj 8149512 | closed | 0 | 7 | 2020-02-13T10:19:57Z | 2020-02-27T04:16:08Z | 2020-02-27T04:16:07Z | NONE | testing some data from european power information (entsoe.eu), the title of the csv contains square brackets. as I am playing with glitch, sqlite-utils are used for creating the db. Traceback (most recent call last): File "/app/.local/bin/sqlite-utils", line 8, in <module>
File "/app/.local/lib/python3.7/site-packages/click/core.py", line 764, in call
File "/app/.local/lib/python3.7/site-packages/click/core.py", line 717, in main
File "/app/.local/lib/python3.7/site-packages/click/core.py", line 1137, in invoke
File "/app/.local/lib/python3.7/site-packages/click/core.py", line 956, in invoke
File "/app/.local/lib/python3.7/site-packages/click/core.py", line 555, in invoke
File "/app/.local/lib/python3.7/site-packages/sqlite_utils/cli.py", line 434, in insert
File "/app/.local/lib/python3.7/site-packages/sqlite_utils/cli.py", line 384, in insert_upsert_implementation
File "/app/.local/lib/python3.7/site-packages/sqlite_utils/db.py", line 997, in insert_all
File "/app/.local/lib/python3.7/site-packages/sqlite_utils/db.py", line 618, in create
File "/app/.local/lib/python3.7/site-packages/sqlite_utils/db.py", line 310, in create_table
sqlite3.OperationalError: unrecognized token: "]" entsoe_2016.csv renamed to txt for uploading compatibility code is remixed directly from your https://glitch.com/edit/#!/datasette-csvs repo |
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1239034903 | I_kwDOCGYnMM5J2iwX | 433 | CLI eats my cursor | chapmanjacobd 7908073 | closed | 0 | 10 | 2022-05-17T18:52:52Z | 2023-11-04T00:46:30Z | 2023-11-04T00:46:30Z | CONTRIBUTOR | I'm not sure why this happens but I can still type commands after it runs but the text cursor is invisible |
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1355433619 | PR_kwDOCGYnMM4-B7Mc | 480 | search_sql add include_rank option | chapmanjacobd 7908073 | closed | 0 | 4 | 2022-08-30T09:10:29Z | 2022-08-31T03:40:35Z | 2022-08-31T03:40:35Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/480 | I haven't tested this yet but wanted to get a heads-up whether this kind of change would be useful or if I should just duplicate the function and tweak it within my code :books: Documentation preview :books:: https://sqlite-utils--480.org.readthedocs.build/en/480/ |
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1361355564 | I_kwDOCGYnMM5RJKMs | 482 | balanced table default column_order | chapmanjacobd 7908073 | closed | 0 | 1 | 2022-09-05T03:00:18Z | 2022-10-10T17:43:02Z | 2022-09-06T20:17:27Z | CONTRIBUTOR | Is there any performance or size difference with column order in SQLITE ? similar to this https://www.cybertec-postgresql.com/en/column-order-in-postgresql-does-matter/ It might be interesting to have an option to create with an optimized column order. I'm assuming this would look something like INTEGER columns, REAL columns, BLOB columns, TEXT columns, NULL columns. NULL columns at the end because they are more likely to be TEXT and it is impossible to know if they will become INTEGER (Of course, any schema evolution would reduce optimization but maybe column order could also be re-evaluated when schema changes) edit: this is easy to accomplish with the existing
|
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1393212964 | I_kwDOCGYnMM5TCr4k | 497 | column_names | chapmanjacobd 7908073 | closed | 0 | 1 | 2022-10-01T03:34:21Z | 2022-10-25T21:09:28Z | 2022-10-25T21:09:28Z | CONTRIBUTOR | It would be nice to have a Or if you could get one or all of the following syntax to work for both Database and Table that might be even better: Style 1
- Style 2
- maybe the table ones actually work but I'm too lazy to check. I just know that I have to do:
Edit: This is possible with |
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1404013495 | PR_kwDOCGYnMM5AicIh | 498 | fix: enable-fts permanently save triggers | chapmanjacobd 7908073 | closed | 0 | 2 | 2022-10-11T05:10:51Z | 2022-10-15T04:33:08Z | 2022-10-11T06:34:31Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/498 | I was wondering why my all my databases were giving wild search results. Turns out create_trigger was not sticking! Running :books: Documentation preview :books:: https://sqlite-utils--498.org.readthedocs.build/en/498/ |
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1430325103 | I_kwDOCGYnMM5VQQdv | 507 | conn.execute: UnicodeEncodeError: 'utf-8' codec can't encode character | chapmanjacobd 7908073 | closed | 0 | 1 | 2022-10-31T18:49:51Z | 2022-11-01T00:40:17Z | 2022-11-01T00:40:16Z | CONTRIBUTOR | I'm not really sure what caused this and it happened in the middle of my program (after running for 35775 seconds).
This might be relevant: https://stackoverflow.com/questions/31898353/python-cant-encode-with-surrogateescape I'm going to try re-running with
``` |
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1430563092 | PR_kwDOCGYnMM5B6_6K | 508 | Allow surrogates in parameters | chapmanjacobd 7908073 | closed | 0 | 2 | 2022-10-31T22:11:49Z | 2022-11-17T15:11:16Z | 2022-10-31T22:55:36Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/508 | closes #507 https://dwheeler.com/essays/fixing-unix-linux-filenames.html :books: Documentation preview :books:: https://sqlite-utils--508.org.readthedocs.build/en/508/ |
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1436539554 | I_kwDOCGYnMM5Vn9qi | 511 | [insert_all, upsert_all] IntegrityError: constraint failed | chapmanjacobd 7908073 | closed | 0 | 2 | 2022-11-04T19:21:48Z | 2022-11-04T22:59:54Z | 2022-11-04T22:54:09Z | CONTRIBUTOR | My understand is that ``` import argparse from pathlib import Path from xklb import db, utils from xklb.utils import log def parse_args() -> argparse.Namespace: parser = argparse.ArgumentParser() parser.add_argument("database") parser.add_argument("dbs", nargs="*") parser.add_argument("--upsert") parser.add_argument("--db", "-db", help=argparse.SUPPRESS) parser.add_argument("--verbose", "-v", action="count", default=0) args = parser.parse_args()
def merge_db(args, source_db): source_db = str(Path(source_db).resolve())
def merge_dbs(): args = parse_args() for s_db in args.dbs: merge_db(args, s_db) if name == "main": merge_dbs() ``` ``` $ lb-dev merge video.db tube_71.db --upsert path -vv SQL: INSERT OR IGNORE INTO media VALUES(?); - params: ['https://archive.org/details/088ghostofachanceroygetssackedrevengeofthelivinglunchdvdripxvidphz'] ... File ~/.local/lib/python3.10/site-packages/sqlite_utils/db.py:3122, in Table.insert_all(self, records, pk, foreign_keys, column_order, not_null, defaults, batch_size, hash_id, hash_id_columns, alter, ignore, replace, truncate, extracts, conversions, columns, upsert, analyze) 3116 all_columns += [ 3117 column for column in record if column not in all_columns 3118 ] 3120 first = False -> 3122 self.insert_chunk( 3123 alter, 3124 extracts, 3125 chunk, 3126 all_columns, 3127 hash_id, 3128 hash_id_columns, 3129 upsert, 3130 pk, 3131 conversions, 3132 num_records_processed, 3133 replace, 3134 ignore, 3135 ) 3137 if analyze: 3138 self.analyze() File ~/.local/lib/python3.10/site-packages/sqlite_utils/db.py:2887, in Table.insert_chunk(self, alter, extracts, chunk, all_columns, hash_id, hash_id_columns, upsert, pk, conversions, num_records_processed, replace, ignore) 2885 for query, params in queries_and_params: 2886 try: -> 2887 result = self.db.execute(query, params) 2888 except OperationalError as e: 2889 if alter and (" column" in e.args[0]): 2890 # Attempt to add any missing columns, then try again File ~/.local/lib/python3.10/site-packages/sqlite_utils/db.py:484, in Database.execute(self, sql, parameters) 482 self._tracer(sql, parameters) 483 if parameters is not None: --> 484 return self.conn.execute(sql, parameters) 485 else: 486 return self.conn.execute(sql) IntegrityError: constraint failed
|
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1581090327 | I_kwDOCGYnMM5ePYYX | 529 | Microsoft line endings | chapmanjacobd 7908073 | closed | 0 | 1 | 2023-02-12T02:20:48Z | 2023-06-14T23:12:12Z | 2023-06-14T23:11:47Z | CONTRIBUTOR | sqlite-utils prints It has tripped me up a few times when piping the output of sqlite-utils to other programs:
|
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1655860104 | I_kwDOCGYnMM5ismuI | 535 | rows: --transpose or psql extended view-like functionality | chapmanjacobd 7908073 | closed | 0 | 2 | 2023-04-05T15:37:33Z | 2023-06-15T08:39:49Z | 2023-06-14T22:05:28Z | CONTRIBUTOR | It would be nice if the rows subcommand had a flag, perhaps called In other words instead of this:
| track_id | title | song_id | release | artist_id | artist_mbid | artist_name | duration | artist_familiarity | artist_hotttnesss | year | track_7digitalid | shs_perf | shs_work | |--------------------|-------------------|--------------------|--------------------------------------|--------------------|--------------------------------------|------------------|------------|----------------------|---------------------|--------|--------------------|------------|------------| | TRMMMYQ128F932D901 | Silent Night | SOQMMHC12AB0180CB8 | Monster Ballads X-Mas | ARYZTJS1187B98C555 | 357ff05d-848a-44cf-b608-cb34b5701ae5 | Faster Pussy cat | 252.055 | 0.649822 | 0.394032 | 2003 | 7032331 | -1 | 0 | | TRMMMKD128F425225D | Tanssi vaan | SOVFVAK12A8C1350D9 | Karkuteillä | ARMVN3U1187FB3A1EB | 8d7ef530-a6fd-4f8f-b2e2-74aec765e0f9 | Karkkiautomaatti | 156.551 | 0.439604 | 0.356992 | 1995 | 1514808 | -1 | 0 | | TRMMMRX128F93187D9 | No One Could Ever | SOGTUKN12AB017F4F1 | Butter | ARGEKB01187FB50750 | 3d403d44-36ce-465c-ad43-ae877e65adc4 | Hudson Mohawke | 138.971 | 0.643681 | 0.437504 | 2006 | 6945353 | -1 | 0 | | TRMMMCH128F425532C | Si Vos Querés | SOBNYVR12A8C13558C | De Culo | ARNWYLR1187B9B2F9C | 12be7648-7094-495f-90e6-df4189d68615 | Yerba Brava | 145.058 | 0.448501 | 0.372349 | 2003 | 2168257 | -1 | 0 | | TRMMMWA128F426B589 | Tangle Of Aspens | SOHSBXH12A8C13B0DF | Rene Ablaze Presents Winter Sessions | AREQDTE1269FB37231 | | Der Mystic | 514.298 | 0 | 0 | 0 | 2264873 | -1 | 0 | The output would look something like this:
| track_id | |--------------------| | TRYYYVU12903CD01E3 | | TRYYYDJ128F9310A21 | | TRYYYMG128F4260ECA | | TRYYYJO128F426DA37 | | TRYYYUS12903CD2DF0 | | title | |-------------------------------------| | Fernweh feat. Sektion Kuchikäschtli | | Faraday | | Novemba | | Jago Chhadeo | | O Samba Da Vida | | song_id | |--------------------| | SOWXJXQ12AB0189F43 | | SOLXGOR12A81C21EB7 | | SOHODZI12A8C137BB3 | | SOXQYIQ12A8C137FBB | | SOTXAME12AB018F136 | | release | |---------------------------------| | So Oder So | | The Trance Collection Vol. 2 | | Dub_Connected: electronic music | | Naale Baba Lassi Pee Gya | | Pacha V.I.P. | | artist_id | |--------------------| | AR7PLM21187B990D08 | | ARCMCOK1187B9B1073 | | ARZ3R6M1187B9AF750 | | ART5FZD1187B9A7FCF | | AR7Z4J81187FB3FC59 | | artist_mbid | |--------------------------------------| | 3af2b07e-c91c-4160-9bda-f0b9e3144ed3 | | 4ac5f3de-c5ad-475e-ad50-41f1ef9dba20 | | 8b97e9c8-61f5-4615-9a96-276f24204e34 | | 2357c400-9109-42b6-b3fe-9e2d9f8e3872 | | 9d50cb20-7e42-45cc-b0dd-154c3e92a577 | | artist_name | |----------------| | Texta | | Elude | | Gabriel Le Mar | | Kuldeep Manak | | Kiko Navarro | | duration | |------------| | 295.079 | | 484.519 | | 553.038 | | 244.166 | | 217.443 | | artist_familiarity | |----------------------| | 0.552977 | | 0.403668 | | 0.556918 | | 0.4015 | | 0.528617 | | artist_hotttnesss | |---------------------| | 0.454869 | | 0.256935 | | 0.336914 | | 0.374866 | | 0.411595 | | year | |--------| | 2004 | | 0 | | 0 | | 0 | | 0 | | track_7digitalid | |--------------------| | 8486723 | | 5472456 | | 2219291 | | 1632096 | | 7522478 | | shs_perf | |------------| | -1 | | -1 | | -1 | | -1 | | -1 | | shs_work | |------------| | 0 | | 0 | | 0 | | 0 | | 0 | |
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1740150327 | I_kwDOCGYnMM5nuJY3 | 557 | Aliased ROWID option for tables created from alter=True commands | chapmanjacobd 7908073 | closed | 0 | 2 | 2023-06-04T05:29:28Z | 2023-06-14T06:09:21Z | 2023-06-05T19:26:26Z | CONTRIBUTOR |
ROWID should never be used with foreign keys but the simple act of aliasing rowid to id (which is what happens when one does It would be convenient if there were more options to use a string column (eg. filepath) as the PK, and be able to use it during upserts, but when creating a foreign key, to create an integer column which aliases rowid I made an attempt to switch to integer primary keys here but it is not going well... In my usecase the path column is a business key. Yes, it should be as simple as including the https://github.com/chapmanjacobd/library/actions/runs/5173602136/jobs/9319024777 |
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934123448 | MDU6SXNzdWU5MzQxMjM0NDg= | 295 | Insert with --tsv and --no-headers give error about --nl arguments | davidscotson 7288187 | closed | 0 | 1 | 2021-06-30T21:01:01Z | 2021-08-18T20:19:04Z | 2021-08-18T20:18:57Z | NONE | Not quite sure if this is a bug, or just an assumption I made but I thought Instead it says:
As if it has interpreted the --no-headers as --nl. The --help does specifically say CSV:
And this heading in the documentation also only refers to CSV, but the text does mention TSV in passing, and I'd generally expect them to behave the same in most cases. https://sqlite-utils.datasette.io/en/stable/cli.html#csv-files-without-a-header-row |
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810618495 | MDU6SXNzdWU4MTA2MTg0OTU= | 235 | Extract columns cannot create foreign key relation: sqlite3.OperationalError: table sqlite_master may not be modified | kristomi 6913891 | closed | 0 | 18 | 2021-02-17T23:33:23Z | 2023-06-26T01:47:01Z | 2023-06-25T23:25:53Z | NONE | Thanks for what seems like a truly great suite of libraries. I wanted to try out Datasette, but never got more than half way through your YouTube video with the SF tree dataset. Whenever I try to extract a column, I get a I have tried googling the problem, but all I've found is that this might be a problem with the sqlite3 database running in defensive mode, but I definitely can't know for sure. Does the problem seem familiar to you? |
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868188068 | MDU6SXNzdWU4NjgxODgwNjg= | 257 | Insert from JSON containing strings with non-ascii characters are escaped as unicode for lists, tuples, dicts. | dylan-wu 6586811 | closed | 0 | 0 | 2021-04-26T20:46:25Z | 2021-05-19T02:57:05Z | 2021-05-19T02:57:05Z | CONTRIBUTOR | JSON Test File (test.json):
Command to import:
Resulting table view from datasette: Original, db.py line 2225:
Fix, db.py line 2225:
|
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868191959 | MDExOlB1bGxSZXF1ZXN0NjIzNzU1NzIz | 258 | Fixing insert from JSON containing strings with non-ascii characters … | dylan-wu 6586811 | closed | 0 | 1 | 2021-04-26T20:50:00Z | 2021-05-19T02:47:44Z | 2021-05-19T02:47:44Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/258 | …are escaped aps unicode for lists, tuples, dicts Fix of #257 |
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1382457780 | I_kwDOCGYnMM5SZqG0 | 490 | Ability to insert multi-line files | jeqo 6180701 | closed | 0 | 4 | 2022-09-22T13:29:22Z | 2022-09-26T18:24:44Z | 2022-09-23T16:37:58Z | NONE | I was looking into how to parse application log files that contain multiline text (e.g. Java stack traces) into sqlite.
I can see that at the moment I wonder if this functionality would be useful for sqlite-utils. A similar approach to Elastic logstash/filebeat can be adopted: https://www.elastic.co/guide/en/beats/filebeat/current/multiline-examples.html Potential changes:
Or if this is achievable in a different way, please share. Thanks! |
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500783373 | MDU6SXNzdWU1MDA3ODMzNzM= | 62 | [enhancement] Method to delete a row in python | Sergeileduc 4454869 | closed | 0 | 5 | 2019-10-01T09:45:47Z | 2019-11-04T16:30:34Z | 2019-11-04T16:18:18Z | NONE | Hi ! Thanks for the lib ! Obviously, every possible sql queries won't have a dedicated method. But I was thinking : a method to delete a row (I'm terrible with names, maybe I have a Database, with primary key. For the moment, I use :
Works like a charm. Just an idea :
Pros : well, no need to write SQL query. Cons : WHERE normally allows to do many more things (operators =, <>, >, <, BETWEEN), not to mention AND, OR, etc... Method is maybe to specific, and/or a pain to render more flexible. Again, just a thought. Writing his own sql works too, so... Thanks again. See yah. |
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1919296686 | PR_kwDOCGYnMM5bifPC | 596 | Fixes mapping for time fields related to mysql, closes #522 | nezhar 4420927 | closed | 0 | 1 | 2023-09-29T13:41:48Z | 2023-11-04T00:49:50Z | 2023-11-04T00:49:50Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/596 | Adds :books: Documentation preview :books:: https://sqlite-utils--596.org.readthedocs.build/en/596/ |
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1079422215 | I_kwDOCGYnMM5AVq0H | 357 | pytest-runner is not required | pgajdos 4067843 | closed | 0 | 1 | 2021-12-14T07:51:24Z | 2021-12-16T20:43:19Z | 2021-12-16T20:43:13Z | NONE | Deprecated pytest-runner is not necessary for running the testsuite. |
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1171599874 | I_kwDOCGYnMM5F1TIC | 415 | Convert with `--multi` and `--dry-run` flag does not work | dotcs 3976183 | closed | 0 | 2 | 2022-03-16T21:59:46Z | 2022-03-21T04:18:24Z | 2022-03-21T04:18:24Z | NONE | It's not possible to combine Let's first create a simple database from JSON string
and then try to convert the "foo" column with a static value "bar" (see docs Converting a column into multiple columns)
But without the
|
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979612115 | MDExOlB1bGxSZXF1ZXN0NzE5OTk4MjI1 | 322 | Add dict type to be mapped as TEXT in sqllite | minaeid90 2496189 | closed | 0 | 1 | 2021-08-25T20:54:26Z | 2021-11-15T00:27:40Z | 2021-11-15T00:27:40Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/322 | the library deal with Postgres type jsonb as dictionary, add dict type as a TEXT for mapping to sqlite |
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1432377191 | I_kwDOCGYnMM5VYFdn | 509 | `sqlite-utils transform` breaks DEFAULT string values and STRFTIME() | kennysong 2199875 | closed | 0 | 0 | 2022-11-02T02:32:23Z | 2023-05-08T21:13:38Z | 2023-05-08T21:13:38Z | NONE | Very nice library! Our team found sqlite-utils through @simonw's comment on the "Simple declarative schema migration for SQLite" article, and we were excited to use it, but unfortunately Running
Here are steps to reproduce: Original database ``` $ sqlite3 test.db << EOF CREATE TABLE mytable ( col1 TEXT DEFAULT 'foo', col2 TEXT DEFAULT (STRFTIME('%Y-%m-%d %H:%M:%f', 'NOW')) ) EOF $ sqlite3 test.db "SELECT sql FROM sqlite_master WHERE name = 'mytable';" CREATE TABLE mytable ( col1 TEXT DEFAULT 'foo', col2 TEXT DEFAULT (STRFTIME('%Y-%m-%d %H:%M:%f', 'NOW')) ) ``` Modified database after sqlite-utils ``` $ sqlite3 test.db "INSERT INTO mytable DEFAULT VALUES; SELECT * FROM mytable;" foo|2022-11-02 02:26:58.038 $ sqlite-utils transform test.db mytable --rename col1 renamedcol1 $ sqlite3 test.db "SELECT sql FROM sqlite_master WHERE name = 'mytable';" CREATE TABLE "mytable" ( [renamedcol1] TEXT DEFAULT '''foo''', [col2] TEXT DEFAULT 'STRFTIME(''%Y-%m-%d %H:%M:%f'', ''NOW'')' ) $ sqlite3 test.db "INSERT INTO mytable DEFAULT VALUES; SELECT * FROM mytable;" foo|2022-11-02 02:26:58.038 'foo'|STRFTIME('%Y-%m-%d %H:%M:%f', 'NOW') ``` (Related: #336) |
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951581763 | MDU6SXNzdWU5NTE1ODE3NjM= | 298 | Read lines with JSON object | qqilihq 2172260 | closed | 0 | 2 | 2021-07-23T13:28:52Z | 2021-08-03T06:50:47Z | 2021-08-02T21:55:16Z | NONE | I found this posted on HN a while ago and love it -- thank you! As a minor improvement, it would be great to have the ability to parse a file with line-separated JSON objects. Currently the parser obviously requires an array wrapping all these objects. |
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1039037439 | PR_kwDOCGYnMM4t0uaI | 333 | Add functionality to read Parquet files. | Florents-Tselai 2118708 | closed | 0 | 3 | 2021-10-28T23:43:19Z | 2021-11-25T19:47:35Z | 2021-11-25T19:47:35Z | NONE | simonw/sqlite-utils/pulls/333 | I needed this for a project of mine, and I thought it'd be useful to have it in sqlite-utils (It's also mentioned in #248 ). The current implementation works (data is read & data types are inferred correctly. I've added a single straightforward test case, but @simonw please let me know if there are any non-obvious flags/combinations I should test too. |
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857280617 | MDExOlB1bGxSZXF1ZXN0NjE0NzI3MDM2 | 254 | Fix incorrect create-table cli description | robjwells 1935268 | closed | 0 | 1 | 2021-04-13T20:03:15Z | 2021-05-19T04:43:46Z | 2021-05-19T02:57:26Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/254 | The description for |
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1279863844 | I_kwDOCGYnMM5MSSwk | 449 | Utilities for duplicating tables and creating a table with the results of a query | davidleejy 1690072 | closed | 0 | 4 | 2022-06-22T09:41:43Z | 2022-07-15T21:46:13Z | 2022-07-15T21:21:36Z | CONTRIBUTOR | is there a duplicate table functionality? Otherwise, I'd be happy to submit a PR. In sqlite3 it would look like: ```python import sqlite3 as sl con = sl.connect('prompt-tune.db') def db_duplicate_table(table_name, table_name_new, con=con):
# Duplicates table db_duplicate_table('orig_table', 'new_table') ``` |
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1299760627 | PR_kwDOCGYnMM47JUun | 452 | Add duplicate table feature | davidleejy 1690072 | closed | 0 | 1 | 2022-07-09T20:24:31Z | 2022-07-15T21:21:37Z | 2022-07-15T21:21:36Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/452 | This PR addresses a feature request raised in issue #449. Specifically this PR adds a functionality that lets users duplicate a table via:
Test added in file Happy to make changes to meet maintainers' feedback, if any. |
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593751293 | MDU6SXNzdWU1OTM3NTEyOTM= | 97 | Adding a "recreate" flag to the `Database` constructor | betatim 1448859 | closed | 0 | 4 | 2020-04-04T05:41:10Z | 2020-04-15T14:29:31Z | 2020-04-13T03:52:29Z | NONE | I have a script that imports data into a sqlite DB. When I re-run that script I'd like to remove the existing sqlite DB, instead of adding to it. The pragmatic answer is to add the check and file deletion to my script. However I thought it would be easy and useful for others to add a Does anyone have an idea/suggestion where to start investigating? |
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1257724585 | I_kwDOCGYnMM5K91qp | 441 | Combining `rows_where()` and `search()` to limit which rows are searched | betatim 1448859 | closed | 0 | 4 | 2022-06-02T06:01:55Z | 2022-06-14T21:57:57Z | 2022-06-14T21:54:38Z | NONE | What is the right way to limit a full text search query to some rows of a table? For example, I have a table that contains the following columns: I tried to combine My two questions:
1. is adding a Right now I am thinking I will make my own version of Bonus question: is this generally useful/something to add to sqlite-utils or too niche? |
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1212701569 | I_kwDOCGYnMM5ISFuB | 427 | sqlite-utils convert date parsing recipe complains about trying to parse "*" | wdccdw 1385831 | closed | 0 | 1 | 2022-04-22T19:27:10Z | 2022-07-02T13:59:59Z | 2022-07-02T13:59:32Z | NONE | Missing values in my dataset are denoted by a single asterisk. I am trying to parse string dates into dates. This works fine for columns without missing values, but, when the column contains "*", I get the following: ``` $ sqlite-utils convert ${dbfile} details dob 'r.parsedate(value)' [------------------------------------] 0%Traceback (most recent call last): File "/usr/local/Cellar/sqlite-utils/3.25.1/libexec/lib/python3.9/site-packages/sqlite_utils/db.py", line 2508, in convert_value return fn(v) File "<string>", line 2, in fn File "/usr/local/Cellar/sqlite-utils/3.25.1/libexec/lib/python3.9/site-packages/sqlite_utils/recipes.py", line 8, in parsedate parser.parse(value, dayfirst=dayfirst, yearfirst=yearfirst).date().isoformat() File "/usr/local/Cellar/sqlite-utils/3.25.1/libexec/lib/python3.9/site-packages/dateutil/parser/_parser.py", line 1368, in parse return DEFAULTPARSER.parse(timestr, **kwargs) File "/usr/local/Cellar/sqlite-utils/3.25.1/libexec/lib/python3.9/site-packages/dateutil/parser/_parser.py", line 643, in parse raise ParserError("Unknown string format: %s", timestr) dateutil.parser._parser.ParserError: Unknown string format: * Traceback (most recent call last): File "/usr/local/bin/sqlite-utils", line 33, in <module> sys.exit(load_entry_point('sqlite-utils==3.25.1', 'console_scripts', 'sqlite-utils')()) File "/usr/local/Cellar/sqlite-utils/3.25.1/libexec/lib/python3.9/site-packages/click/core.py", line 1128, in call return self.main(args, kwargs) File "/usr/local/Cellar/sqlite-utils/3.25.1/libexec/lib/python3.9/site-packages/click/core.py", line 1053, in main rv = self.invoke(ctx) File "/usr/local/Cellar/sqlite-utils/3.25.1/libexec/lib/python3.9/site-packages/click/core.py", line 1659, in invoke return _process_result(sub_ctx.command.invoke(sub_ctx)) File "/usr/local/Cellar/sqlite-utils/3.25.1/libexec/lib/python3.9/site-packages/click/core.py", line 1395, in invoke return ctx.invoke(self.callback, ctx.params) File "/usr/local/Cellar/sqlite-utils/3.25.1/libexec/lib/python3.9/site-packages/click/core.py", line 754, in invoke return __callback(args, **kwargs) File "/usr/local/Cellar/sqlite-utils/3.25.1/libexec/lib/python3.9/site-packages/sqlite_utils/cli.py", line 2698, in convert db[table].convert( File "/usr/local/Cellar/sqlite-utils/3.25.1/libexec/lib/python3.9/site-packages/sqlite_utils/db.py", line 2524, in convert self.db.execute(sql, where_args or []) File "/usr/local/Cellar/sqlite-utils/3.25.1/libexec/lib/python3.9/site-packages/sqlite_utils/db.py", line 458, in execute return self.conn.execute(sql, parameters) sqlite3.OperationalError: user-defined function raised exception ``` |
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1622640374 | I_kwDOCGYnMM5gt4b2 | 534 | ResourceWarning: unclosed file | djhenderson 1244826 | closed | 0 | 1 | 2023-03-14T03:02:18Z | 2023-05-08T19:56:29Z | 2023-05-08T19:56:29Z | NONE | Issuing either
exhibits a ResourceWarning indicating that the CSV file being loaded is not closed. sqlite-utils --version sqlite-utils, version 3.30 py --version Python 3.11.2 Windows Version 10.0.19045 Build 19045 SQLite version 3.41.0 2023-02-21 18:09:37 |
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1695428235 | I_kwDOCGYnMM5lDi6L | 538 | `table.upsert_all` fails to write rows when `not_null` is present | xavdid 1231935 | closed | 0 | 9 | 2023-05-04T07:30:38Z | 2023-05-08T20:06:35Z | 2023-05-08T19:27:02Z | NONE | I found an odd bug today, where calls to Repro Example```py from sqlite_utils import Database db = Database("upsert-test.db") db["comments"].upsert_all( [{"id": 1, "name": "david"}], pk="id", not_null=["name"], ) assert list(db["comments"].rows) # err! ``` The schema is correctly created:
But no rows are created. Removing either the Version Info
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1434911255 | I_kwDOCGYnMM5VhwIX | 510 | Cannot enable FTS5 despite it being available | ar-jan 1176293 | closed | 0 | 3 | 2022-11-03T16:03:49Z | 2022-11-18T18:37:52Z | 2022-11-17T10:36:28Z | NONE | When I do FTS5 is however available and Python/SQLite versions do not seem to be the issue. I can manually create the FTS5 virtual table, and then Datasette also works with it from this same Python environment.
Any ideas what's happening and how to fix? |
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830803173 | MDExOlB1bGxSZXF1ZXN0NTkyMjg5MzI0 | 245 | Correct some typos | dbready 1076745 | closed | 0 | 1 | 2021-03-13T04:26:56Z | 2021-05-19T02:58:04Z | 2021-05-19T02:58:04Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/245 | Noticed a typo in the docs and followed that up with a spellcheck. Had to bite my tongue at some of the British spellings. |
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925677191 | MDU6SXNzdWU5MjU2NzcxOTE= | 289 | Mypy fixes for rows_from_file() | adamchainz 857609 | closed | 0 | 3 | 2021-06-20T20:34:59Z | 2021-06-22T18:44:36Z | 2021-06-22T18:13:26Z | NONE | Following https://github.com/simonw/sqlite-utils/issues/279#issuecomment-864328927 You had two mypy errors. The first:
Looking at the ``` Detect the format, then call this recursivelybuffered = io.BufferedReader( cast(io.RawIOBase, fp), # Undocumented BufferedReader support for BinaryIO buffer_size=4096, ) ``` The second error seems to be flagging a legitimate bug in your code:
From your type hints, |
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1046271107 | PR_kwDOCGYnMM4uK5z2 | 337 | Default values for `--attach` and `--param` options | urbas 771193 | closed | 0 | 1 | 2021-11-05T21:57:53Z | 2021-11-05T22:33:03Z | 2021-11-05T22:33:02Z | NONE | simonw/sqlite-utils/pulls/337 | It seems that This change makes the code forward-compatible with See this build failure for more info: https://hydra.nixos.org/build/156926608 |
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1178546862 | I_kwDOCGYnMM5GPzKu | 420 | Document how to use a `--convert` function that runs initialization code first | strada 770231 | closed | 0 | 12 | 2022-03-23T19:07:36Z | 2022-08-28T11:34:37Z | 2022-03-25T20:07:33Z | NONE | When I have an insert command with transform like this:
I noticed as the number of rows increases the operation becomes quite slow, likely due to the creation of the |
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711649325 | MDU6SXNzdWU3MTE2NDkzMjU= | 182 | Better handling of encodings other than utf-8 for "sqlite-utils insert" | kaihendry 765871 | closed | 0 | 5 | 2020-09-30T05:43:48Z | 2020-10-16T17:20:41Z | 2020-10-16T17:18:52Z | NONE | Makefile: ``` data.db: curl -O http://maps.natalian.org/data.txt go run csv-write.go > data.csv sqlite-utils insert data.db travels data.csv --csv clean: rm data* ``` csv-write.go Error message is:
Little bit surprised if Go is spewing out bad Unicode, but I'm not sure how to grok |
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760960559 | MDU6SXNzdWU3NjA5NjA1NTk= | 205 | sqlite3.OperationalError: near "(": syntax error | kaihendry 765871 | closed | 0 | 2 | 2020-12-10T06:44:40Z | 2020-12-10T19:18:22Z | 2020-12-10T07:24:23Z | NONE | The sqlite version is 3.22.0 2018-01-22 18:45:57 0c55d179733b46d8d0ba4d88e01a25e10677046ee3da1d5b1581e86726f2alt1 sqlite-utils, version 3.0 It fails here: https://github.com/kaihendry/aws-partners-datasette/runs/1528432635?check_suite_focus=true I'm not sure where the problem is, since it works fine locally on Archlinux system running 3.34.0 2020-12-01 16:14:00 a26b6597e3ae272231b96f9982c3bcc17ddec2f2b6eb4df06a224b91089fed5b https://github.com/kaihendry/aws-partners-datasette/blob/main/create-summary-view.sh Maybe I need to bump up from ubuntu-latest to ? |
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1123903919 | I_kwDOCGYnMM5C_Wmv | 397 | Support IF NOT EXISTS for table creation | rafguns 738408 | closed | 0 | 3 | 2022-02-04T07:41:15Z | 2022-02-06T01:30:46Z | 2022-02-06T01:29:01Z | NONE | Currently, I have a bunch of code that looks like this:
|
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432727685 | MDU6SXNzdWU0MzI3Mjc2ODU= | 20 | JSON column values get extraneously quoted | mhalle 649467 | closed | 0 | 1.0 4348046 | 1 | 2019-04-12T20:15:30Z | 2019-05-25T00:57:19Z | 2019-05-25T00:57:19Z | NONE | If the input to ``` echo '[{"key": ["one", "two", "three"]}]' | sqlite-utils insert t.db t -sqlite-utils t.db 'select * from t'[{"key": "[\"one\", \"two\", \"three\"]"}] sqlite3 t.db 'select * from t'["one", "two", "three"] ``` This might require an imperfect solution, since sqlite3 doesn't have a JSON type. Perhaps fields that start with |
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707407567 | MDU6SXNzdWU3MDc0MDc1Njc= | 171 | Idea: transitive closure tables for tree structures | mhalle 649467 | closed | 0 | 2 | 2020-09-23T14:17:33Z | 2020-10-22T04:38:35Z | 2020-10-22T04:07:14Z | NONE | I just read that sqlite has a transitive closure table extension using a virtual table in order to represent trees: Even without this extension, though, a util to build a transitive closure table would allow trees to be queried easily. Since it relies on self-referential foreign keys, the relationships might even be able to be automatically detected. |
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783778672 | MDU6SXNzdWU3ODM3Nzg2NzI= | 220 | Better error message for *_fts methods against views | mhalle 649467 | closed | 0 | 3 | 2021-01-11T23:24:00Z | 2021-02-22T20:44:51Z | 2021-02-14T22:34:26Z | NONE | enable_fts and its related methods only work on tables, not views. Could those methods and possibly others move up to the Queryable superclass? |
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815554385 | MDU6SXNzdWU4MTU1NTQzODU= | 237 | db["my_table"].drop(ignore=True) parameter, plus sqlite-utils drop-table --ignore and drop-view --ignore | mhalle 649467 | closed | 0 | 3 | 2021-02-24T14:55:06Z | 2021-02-25T17:11:41Z | 2021-02-25T17:11:41Z | NONE | When I'm generating a derived table in python, I often drop the table and create it from scratch. However, the first time I generate the table, it doesn't exist, so the drop raises an exception. That means more boilerplate. I was going to submit a pull request that adds an "if_exists" option to the However, for a utility like sqlite_utils, perhaps the "IF EXISTS" SQL semantics is what you want most of the time, and thus should be the default. What do you think? |
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1392690202 | I_kwDOCGYnMM5TAsQa | 495 | Support JSON values returned from .convert() functions | mhalle 649467 | closed | 0 | 3 | 2022-09-30T16:33:49Z | 2022-10-25T21:23:37Z | 2022-10-25T21:23:28Z | NONE | When using the convert function on a JSON column, the result of the conversion function must be a string. If the return value is either a dict (object) or a list (array), the convert call will error out with an unhelpful user defined function exception. It makes sense that since the original column value was a string and required conversion to data structures, the result should be converted back into a JSON string as well. However, other functions auto-convert to JSON string representation, so the fact that convert doesn't could be surprising. At least the documentation should note this requirement, because the sqlite error messages won't readily reveal the issue. Jf only sqlite's JSON column type meant something :) |
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1173023272 | I_kwDOCGYnMM5F6uoo | 416 | Options for how `r.parsedate()` should handle invalid dates | mattkiefer 638427 | closed | 0 | 11 | 2022-03-17T23:29:55Z | 2022-05-03T21:36:49Z | 2022-03-21T04:01:39Z | NONE | Exceptions are normal expected behavior when typecasting an invalid format. However, r.parsedate() is really just re-formatting strings and keeping the type as text. So it may be better to print-and-pass on exception so the user can see a complete list of invalid values -- while also allowing for the parser to reformat the remaining valid values.
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807817197 | MDU6SXNzdWU4MDc4MTcxOTc= | 229 | Hitting `_csv.Error: field larger than field limit (131072)` | frosencrantz 631242 | closed | 0 | 3 | 2021-02-13T19:52:44Z | 2021-02-14T21:33:33Z | 2021-02-14T21:33:33Z | NONE | I have a csv file where one of the fields is so large it is throwing an exception with this error and stops loading:
The stack trace occurs here: https://github.com/simonw/sqlite-utils/blob/3.1/sqlite_utils/cli.py#L633 There is a way to handle this that helps: https://stackoverflow.com/questions/15063936/csv-error-field-larger-than-field-limit-131072 One issue I had with this problem was sqlite-utils only provides limited context as to where the problem line is. There is the progress bar, but that is by percent rather than by line number. It would have been helpful if it could have provided a line number. Also, it would have been useful if it had allowed the loading to continue with later lines. |
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923602693 | MDU6SXNzdWU5MjM2MDI2OTM= | 276 | support small help flag -h | mcint 601708 | closed | 0 | 0 | 2021-06-17T07:59:31Z | 2021-06-18T14:56:59Z | 2021-06-18T14:56:59Z | CONTRIBUTOR | sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/276/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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923612361 | MDExOlB1bGxSZXF1ZXN0NjcyMzU5NjA5 | 277 | add -h support closes #276 | mcint 601708 | closed | 0 | 2 | 2021-06-17T08:08:26Z | 2021-06-18T14:56:59Z | 2021-06-18T14:56:59Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/277 | This appears to be the canonical solution. |
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923697888 | MDU6SXNzdWU5MjM2OTc4ODg= | 278 | Support db as first parameter before subcommand, or as environment variable | mcint 601708 | closed | 0 | 3 | 2021-06-17T09:26:29Z | 2021-06-20T22:39:57Z | 2021-06-18T15:43:19Z | CONTRIBUTOR | sqlite-utils 140912432 | issue | { "url": "https://api.github.com/repos/simonw/sqlite-utils/issues/278/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
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1042569687 | I_kwDOCGYnMM4-JFnX | 335 | sqlite-utils index-foreign-keys fails due to pre-existing index | zaneselvans 596279 | closed | 0 | 11 | 2021-11-02T16:22:11Z | 2021-11-14T22:55:56Z | 2021-11-14T22:55:56Z | NONE | While running the command:
I got the following error:
This DB was created with the foreign key constraint I'm also noticing that the size of the DB after FK indexes have been added went from 483MB to 835MB, which seems like a much bigger jump than when I've done this previously. Software versions... * sqlite-utils 3.17.1 * sqlite 3.36.0 * SQLAlchemy 1.4.26 (used to create the DB) |
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1243151184 | I_kwDOCGYnMM5KGPtQ | 434 | `detect_fts()` identifies the wrong table if tables have names that are subsets of each other | ryascott 559711 | closed | 0 | 3 | 2022-05-20T13:28:31Z | 2022-06-14T23:24:09Z | 2022-06-14T23:24:09Z | NONE | Windows 10 Python 3.9.6 When I was running a full text search through the Python library, I noticed that the query was being run on a different full text search table than the one I was trying to search. I took a look at the following function and noticed:
My database contains tables with similar names and %{table}% was matching another table that ended differently in its name. I have included a sample test that shows this occurring: I search for Marsupials in db["books"] and The Clue of the Broken Blade is returned. This occurs since the search for Marsupials was "successfully" done against db["booksb"] and rowid 1 is returned. "The Clue of the Broken Blade" has a rowid of 1 in db["books"] and this is what is returned from the search. ```python def test_fts_search_with_similar_table_names(fresh_db): db = Database(memory=True) db["books"].insert_all( [ { "title": "The Clue of the Broken Blade", "author": "Franklin W. Dixon", }, { "title": "Habits of Australian Marsupials", "author": "Marlee Hawkins", }, ] ) db["booksb"].insert( { "title": "Habits of Australian Marsupials", "author": "Marlee Hawkins", } )
``` |
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1091819089 | I_kwDOCGYnMM5BE9ZR | 360 | MemoryError | nzaar9 559453 | closed | 0 | 1 | 2022-01-01T13:39:17Z | 2022-03-21T04:22:46Z | 2022-03-21T04:22:46Z | NONE | HI, when dealing with large json file (~170GB) i got the following error
|
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1665200812 | PR_kwDOCGYnMM5OKveS | 537 | Support self-referencing FKs in `Table.create` | numist 544011 | closed | 0 | 3 | 2023-04-12T20:26:59Z | 2023-05-08T22:45:33Z | 2023-05-08T21:10:01Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/537 | :books: Documentation preview :books:: https://sqlite-utils--537.org.readthedocs.build/en/537/ |
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1367835380 | I_kwDOCGYnMM5Rh4L0 | 487 | Specify foreign key against compound key in other table | ryanfox 540968 | closed | 0 | 2 | 2022-09-09T13:32:09Z | 2022-09-11T04:00:44Z | 2022-09-11T04:00:44Z | NONE | When inserting rows via the library, is it possible to specify a foreign key to a compound primary key? For example, suppose I create a table:
And I want to add related data in another table:
Is it possible to specify a value for SQLite does support it: https://www.sqlite.org/foreignkeys.html#fk_composite |
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1044267332 | I_kwDOCGYnMM4-PkFE | 336 | sqlite-util tranform --column-order mangles columns of type "timestamp" | fgregg 536941 | closed | 0 | 1 | 2021-11-04T01:15:38Z | 2023-05-08T21:13:38Z | 2023-05-08T21:13:38Z | CONTRIBUTOR | Reproducible code below: ```bash
|
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1077102934 | I_kwDOCGYnMM5AM0lW | 353 | Allow passing a file of code to "sqlite-utils convert" | fgregg 536941 | closed | 0 | 8 | 2021-12-10T18:06:14Z | 2021-12-11T01:38:29Z | 2021-12-11T01:09:39Z | CONTRIBUTOR | sqlite-utils is so nice, but the ergonomics of the multiline code in kind of tough. It's really hard (maybe impossible) to make the newlines play well with Makefiles. it would be great to write your code fragment in a separate file and direct it into the sqlite-utils either like
or
Thanks, as ever, for these great tools! |
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1096558279 | I_kwDOCGYnMM5BXCbH | 365 | create-index should run analyze after creating index | fgregg 536941 | closed | 0 | 3.21 7558727 | 16 | 2022-01-07T18:21:25Z | 2022-01-11T02:43:34Z | 2022-01-11T01:36:48Z | CONTRIBUTOR | sqlite's query planner depends upon analyze to make good use of indices. It would be nice if analyze was run as part of the create-index command. If data is inserted later, things can get out date, but it would still probably be a net win. |
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1126692066 | I_kwDOCGYnMM5DJ_Ti | 403 | Document how to add a primary key to a rowid table using `sqlite-utils transform --pk` | fgregg 536941 | closed | 0 | 4 | 2022-02-08T01:39:40Z | 2022-02-09T04:22:43Z | 2022-02-08T19:33:59Z | CONTRIBUTOR | Original title: Add option for adding a new, serial, primary key sometimes we have tables that don't have primary keys, but ought to have them. we can use rowid for that, but it would often be nicer to have an explicit primary key. using the current value of rowid would be fine. |
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1309542173 | PR_kwDOCGYnMM47pwAb | 455 | in extract code, check equality with IS instead of = for nulls | fgregg 536941 | closed | 0 | 3 | 2022-07-19T13:40:25Z | 2022-08-27T14:45:03Z | 2022-08-27T14:45:03Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/455 | sqlite "IS" is equivalent to SQL "IS NOT DISTINCT FROM" closes #423 |
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577302229 | MDU6SXNzdWU1NzczMDIyMjk= | 91 | Enable ordering FTS results by rank | gfrmin 416374 | closed | 0 | 3.0 6079500 | 1 | 2020-03-07T08:43:51Z | 2020-11-06T23:53:26Z | 2020-11-06T23:53:25Z | NONE | According to https://www.sqlite.org/fts5.html (not sure about FTS4) results can be sorted by relevance. At the moment results are returned by default by |
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820468864 | MDExOlB1bGxSZXF1ZXN0NTgzNDA3OTg5 | 244 | Typo in upsert example | j-e-d 387669 | closed | 0 | 1 | 2021-03-02T23:14:14Z | 2021-05-19T02:58:21Z | 2021-05-19T02:58:21Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/244 | Remove extra |
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1303169663 | I_kwDOCGYnMM5NrMp_ | 453 | 'unclosed file' warning when using insert_upsert_implementation from Python | makkus 311257 | closed | 0 | 1 | 2022-07-13T09:34:35Z | 2022-07-15T21:52:25Z | 2022-07-15T21:52:21Z | NONE | I'm using the The warning goes away when wrapping the code from this line in a try/finally block like:
I suspect Python closes the reference automatically when the sqlite-utils cli run is done, but since my code doesn't exit, I'm getting the warning. Alternatively, it'd be cool if the 'import csv/tsv' functionality could be added directly to the Database class. |
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807174161 | MDU6SXNzdWU4MDcxNzQxNjE= | 227 | Error reading csv files with large column data | camallen 295329 | closed | 0 | 4 | 2021-02-12T11:51:47Z | 2021-02-16T11:48:03Z | 2021-02-14T21:17:19Z | NONE | Feel free to close this issue - I mostly added it for reference for future folks that run into this :) I have a CSV file with one column that has very long strings. When i try to import this file via the Traceback (most recent call last):
File "/usr/local/bin/sqlite-utils", line 10, in <module>
sys.exit(cli())
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 829, in call
return self.main(args, kwargs)
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 782, in main
rv = self.invoke(ctx)
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 1259, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 1066, in invoke
return ctx.invoke(self.callback, ctx.params)
File "/usr/local/lib/python3.7/site-packages/click/core.py", line 610, in invoke
return callback(args, kwargs)
File "/usr/local/lib/python3.7/site-packages/sqlite_utils/cli.py", line 774, in insert
default=default,
File "/usr/local/lib/python3.7/site-packages/sqlite_utils/cli.py", line 705, in insert_upsert_implementation
docs, pk=pk, batch_size=batch_size, alter=alter, extra_kwargs
File "/usr/local/lib/python3.7/site-packages/sqlite_utils/db.py", line 1852, in insert_all
first_record = next(records)
File "/usr/local/lib/python3.7/site-packages/sqlite_utils/cli.py", line 703, in <genexpr>
docs = (decode_base64_values(doc) for doc in docs)
File "/usr/local/lib/python3.7/site-packages/sqlite_utils/cli.py", line 681, in <genexpr>
docs = (dict(zip(headers, row)) for row in reader)
_csv.Error: field larger than field limit (131072)
sqlite-utils --versionsqlite-utils, version 3.4.1 datasette --versiondatasette, version 0.54 ``` It appears this is a known issue reading in csv files in python and doesn't look to be modifiable through system / env vars (i may be very wrong on this). Noting that using sqlite3 Finally, I'm loving https://datasette.io/ thank you very much for an amazing tool and data ecosytem 🙇♀️ |
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842062949 | MDU6SXNzdWU4NDIwNjI5NDk= | 252 | Support json-line files | rathboma 279769 | closed | 0 | 1 | 2021-03-26T15:19:39Z | 2021-03-26T15:21:38Z | 2021-03-26T15:21:38Z | NONE | It's common for many processes to create flat files where each line is a JSON object. So the file isn't a json array. Many tools (like jq) support this natively, it'd be great for sqlite-utils to also! |
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861622839 | MDU6SXNzdWU4NjE2MjI4Mzk= | 256 | inserting with --nl errors with: sqlite3.OperationalError: table <table> has no column named <column> | rathboma 279769 | closed | 0 | 2 | 2021-04-19T18:01:03Z | 2021-05-19T03:26:54Z | 2021-05-19T03:26:54Z | NONE | I have a Inserting from the cli with This seems similar to #18 and #139, but maybe it's unique to |
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797159961 | MDExOlB1bGxSZXF1ZXN0NTY0MjE1MDEx | 225 | fix for problem in Table.insert_all on search for columns per chunk of rows | nieuwenhoven 261237 | closed | 0 | 2 | 2021-01-29T20:16:07Z | 2021-02-14T21:04:13Z | 2021-02-14T21:04:13Z | NONE | simonw/sqlite-utils/pulls/225 | Hi, I ran into a problem when trying to create a database from my Apple Healthkit data using healthkit-to-sqlite. The program crashed because of an invalid insert statement that was generated for table The actual problem turned out to be in sqlite-utils. I'm using a Windows machine and had to make a few adjustments to the tests in order to be able to run them because they had a posix dependency. Thanks, kind regards, Frans ``` this is a (condensed) chunk of data from my Apple healthkit export that caused the problem.the 3 last items in the chunk have additional keys: metadata_HKMetadataKeySyncVersion and metadata_HKMetadataKeySyncIdentifierchunk = [{'sourceName': 'AppleÂ\xa0Watch van Frans', 'sourceVersion': '7.0.1', 'device': '<<HKDevice: 0x281cf6c70>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch3,4, software:7.0.1>', 'unit': 'km', 'creationDate': '2020-10-10 12:29:09 +0100', 'startDate': '2020-10-10 12:29:06 +0100', 'endDate': '2020-10-10 12:29:07 +0100', 'value': '0.00518016'}, {'sourceName': 'AppleÂ\xa0Watch van Frans', 'sourceVersion': '7.0.1', 'device': '<<HKDevice: 0x281cf6c70>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch3,4, software:7.0.1>', 'unit': 'km', 'creationDate': '2020-10-10 12:29:10 +0100', 'startDate': '2020-10-10 12:29:07 +0100', 'endDate': '2020-10-10 12:29:08 +0100', 'value': '0.00544049'}, {'sourceName': 'AppleÂ\xa0Watch van Frans', 'sourceVersion': '6.2.6', 'device': '<<HKDevice: 0x281cf83e0>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch3,4, software:6.2.6>', 'unit': 'km', 'creationDate': '2020-10-14 05:54:12 +0100', 'startDate': '2020-07-15 16:40:50 +0100', 'endDate': '2020-07-15 16:42:49 +0100', 'value': '0.952092', 'metadata_HKMetadataKeySyncVersion': '1', 'metadata_HKMetadataKeySyncIdentifier': '3:674DBCDB-3FE8-40D1-9FC1-E54A2B413805:616520450.99823:616520569.99360:119'}, {'sourceName': 'AppleÂ\xa0Watch van Frans', 'sourceVersion': '6.2.6', 'device': '<<HKDevice: 0x281cf83e0>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch3,4, software:6.2.6>', 'unit': 'km', 'creationDate': '2020-10-14 05:54:12 +0100', 'startDate': '2020-07-15 16:42:49 +0100', 'endDate': '2020-07-15 16:44:51 +0100', 'value': '0.848983', 'metadata_HKMetadataKeySyncVersion': '1', 'metadata_HKMetadataKeySyncIdentifier': '3:674DBCDB-3FE8-40D1-9FC1-E54A2B413805:616520569.99360:616520691.98826:119'}, {'sourceName': 'AppleÂ\xa0Watch van Frans', 'sourceVersion': '6.2.6', 'device': '<<HKDevice: 0x281cf83e0>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch3,4, software:6.2.6>', 'unit': 'km', 'creationDate': '2020-10-14 05:54:12 +0100', 'startDate': '2020-07-15 16:44:51 +0100', 'endDate': '2020-07-15 16:46:50 +0100', 'value': '0.834403', 'metadata_HKMetadataKeySyncVersion': '1', 'metadata_HKMetadataKeySyncIdentifier': '3:674DBCDB-3FE8-40D1-9FC1-E54A2B413805:616520691.98826:616520810.98305:119'}] def all_columns_old(): all_columns = [col for col in chunk[0]] all_columns += [column for record in chunk for column in record if column not in all_columns] return all_columns def all_columns_new(): all_columns = [col for col in chunk[0]] for record in chunk: all_columns += [column for column in record if column not in all_columns] return all_columns if name == 'main': from pprint import pprint
``` |
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1334416486 | PR_kwDOCGYnMM488n6D | 463 | Use Read the Docs action v1 | humitos 244656 | closed | 0 | 1 | 2022-08-10T10:31:47Z | 2022-08-18T08:30:14Z | 2022-08-17T23:11:16Z | CONTRIBUTOR | simonw/sqlite-utils/pulls/463 | Read the Docs repository was renamed from :books: Documentation preview :books:: https://sqlite-utils--463.org.readthedocs.build/en/463/ |
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1279144769 | I_kwDOCGYnMM5MPjNB | 448 | Reading rows from a file => AttributeError: '_io.StringIO' object has no attribute 'readinto' | mungewell 236907 | closed | 0 | 5 | 2022-06-21T21:48:27Z | 2023-05-08T22:01:00Z | 2023-05-08T22:01:00Z | NONE | Attempting to run the example given here (without extra bracket ;-): https://sqlite-utils.datasette.io/en/stable/python-api.html#reading-rows-from-a-file ``` from sqlite_utils.utils import rows_from_file import io rows, format = rows_from_file(io.StringIO("id,name\n1,Cleo")) print(list(rows), format) Outputs [{'id': '1', 'name': 'Cleo'}] Format.CSV``` Gives error ```
I am running Python on Windows. ```
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